PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1226
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
HvarHygva1771100270950 Flavonoid F3H medium borderline
HvarHygva1771110271040 Flavonoid F3H medium borderline
HvarHygva17880278070 Flavonoid F3H medium borderline
HvarHygva18280281070 Flavonoid F3H medium borderline
HvarHygva19680293990 Flavonoid F3H low borderline
HvarHygva20310299950 Flavonoid F3H medium borderline
HvarHygva21900314190 Flavonoid F3H medium borderline
HvarHygva21910314260 Flavonoid F3H low borderline
HvarHygva21970314650 Flavonoid F3H medium borderline
HvarHygva22600318890 Flavonoid F3H medium borderline
HvarHygva22660319370 Flavonoid F3H medium borderline
HvarHygva22780320630 Flavonoid F3H medium borderline
HvarHygva22800321090 Flavonoid F3H medium borderline
HvarHygva23880332060 Flavonoid F3H medium borderline
HvarHygva25100344000 Flavonoid F3H low borderline
HvarHygva26050353110 Flavonoid F3H medium borderline
HvarHygva26380356420 Flavonoid F3H medium pass
HvarHygva26780360560 Flavonoid F3H medium pass
HvarHygva27450367100 Flavonoid F3H medium pass
HvarHygva28040373140 Flavonoid F3H medium borderline
HvarHygva2940384540 Flavonoid F3H medium borderline
HvarHygva29890389580 Flavonoid F3H medium borderline
HvarHygva30210392890 Flavonoid F3H medium borderline
HvarHygva5510429270 Flavonoid F3H medium borderline
HvarHygva5960434290 Flavonoid F3H medium borderline
HvarHygva8100454910 Flavonoid F3H medium borderline
HvarHygva8450458860 Flavonoid F3H medium borderline
HvarHygva8490459160 Flavonoid F3H low borderline
HvarHygva8610460630 Flavonoid F3H medium borderline
HvarHygva1547640088440 Flavonoid FLS medium borderline
HvarHygva1760260300 Flavonoid FLS medium borderline
HvarHygva22660319390 Flavonoid FLS medium borderline
HvarHygva5510429280 Flavonoid FLS medium borderline
HvarHygva12310021500 Flavonoid FNS medium borderline
HvarHygva1491480058820 Flavonoid FNS medium borderline
HvarHygva1556650101840 Flavonoid FNS medium borderline
HvarHygva1569440135530 Flavonoid FNS medium borderline
HvarHygva1571670143180 Flavonoid FNS medium borderline
HvarHygva1710224670 Flavonoid FNS low borderline
HvarHygva1780570277400 Flavonoid FNS medium borderline
HvarHygva1780580277430 Flavonoid FNS medium borderline
HvarHygva24260335140 Flavonoid FNS medium borderline
HvarHygva26630359330 Flavonoid FNS medium borderline
HvarHygva8410458600 Flavonoid FNS medium borderline
HvarHygva10060000690 Flavonoid IFR low borderline
HvarHygva10300003230 Flavonoid IFR low borderline
HvarHygva10830007970 Flavonoid IFR low borderline
HvarHygva10950009010 Flavonoid IFR low borderline
HvarHygva12700026890 Flavonoid IFR medium pass
HvarHygva14190043990 Flavonoid IFR low borderline