PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1226
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
HvarHygva18070279520 Steroid DWF5 medium pass
HvarHygva21710312500 Steroid DWF5 medium pass
HvarHygva23330326690 Steroid DWF5 medium borderline
HvarHygva28050373310 Steroid DWF5 high pass
HvarHygva28520377060 Steroid DWF5 medium pass
HvarHygva1255780025140 Steroid DWF7 medium pass
HvarHygva1558140104670 Steroid DWF7 medium pass
HvarHygva1569090134530 Steroid FK high pass
HvarHygva3240406300 Steroid FK high pass
HvarHygva10980009380 Steroid HYD1 high pass
HvarHygva1424560045050 Steroid HYD1 low borderline
HvarHygva930467230 Steroid HYD1 high pass
HvarHygva1563960117870 Steroid ROT3/CYP90C1 medium borderline
HvarHygva1582470179900 Steroid ROT3/CYP90C1 medium borderline
HvarHygva1770620270460 Steroid ROT3/CYP90C1 low borderline
HvarHygva1770630270520 Steroid ROT3/CYP90C1 low borderline
HvarHygva21050306660 Steroid ROT3/CYP90C1 low borderline
HvarHygva23950332330 Steroid ROT3/CYP90C1 medium borderline
HvarHygva5480428980 Steroid ROT3/CYP90C1 low borderline
HvarHygva5650430830 Steroid ROT3/CYP90C1 medium borderline
HvarHygva570431340 Steroid ROT3/CYP90C1 medium borderline
HvarHygva1519090068100 Steroid SMO1/SMO2 medium pass
HvarHygva1550260091330 Steroid SMO1/SMO2 low borderline
HvarHygva1575690157610 Steroid SMO1/SMO2 medium pass
HvarHygva1575690157620 Steroid SMO1/SMO2 medium pass
HvarHygva1576320159130 Steroid SMO1/SMO2 medium pass
HvarHygva1578970168360 Steroid SMO1/SMO2 medium pass
HvarHygva17990278950 Steroid SMO1/SMO2 medium pass
HvarHygva11930018450 Steroid SMT1/SMT2/SMT3 medium pass
HvarHygva12580025370 Steroid SMT1/SMT2/SMT3 medium pass
HvarHygva1310030560 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva13380033430 Steroid SMT1/SMT2/SMT3 medium pass
HvarHygva13850039980 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva1561350111370 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva1566320124540 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva15720144720 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva1580171330 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva1580250172500 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva1580380172950 Steroid SMT1/SMT2/SMT3 medium pass
HvarHygva1582900181520 Steroid SMT1/SMT2/SMT3 medium pass
HvarHygva1585100188890 Steroid SMT1/SMT2/SMT3 medium pass
HvarHygva1586120192640 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva1586620194440 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva1587290197580 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva16970222970 Steroid SMT1/SMT2/SMT3 medium pass
HvarHygva17170230120 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva1737420243690 Steroid SMT1/SMT2/SMT3 medium pass
HvarHygva1737430243750 Steroid SMT1/SMT2/SMT3 medium pass
HvarHygva1743810248730 Steroid SMT1/SMT2/SMT3 low borderline
HvarHygva1743820248750 Steroid SMT1/SMT2/SMT3 low borderline