PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2261
Candidate Protein Records
2075
Pathway-Level Records
5196
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
LchiScaffold370216140 Alkaloid GS high pass
LchiScaffold370216160 Alkaloid GS low borderline
LchiScaffold37040217570 Alkaloid GS low borderline
LchiScaffold390219100 Alkaloid GS low borderline
LchiScaffold4360236160 Alkaloid GS low borderline
LchiScaffold5300262530 Alkaloid GS low borderline
LchiScaffold5300262930 Alkaloid GS medium pass
LchiScaffold5300262940 Alkaloid GS medium pass
LchiScaffold6040276710 Alkaloid GS medium pass
LchiScaffold960347000 Alkaloid GS medium pass
LchiScaffold960347010 Alkaloid GS high pass
LchiScaffold960347060 Alkaloid GS high pass
LchiScaffold960347090 Alkaloid GS medium pass
LchiScaffold960347100 Alkaloid GS medium pass
LchiScaffold9860351770 Alkaloid GS low borderline
LchiScaffold9860351780 Alkaloid GS low borderline
LchiScaffold10240004390 Alkaloid H6H medium borderline
LchiScaffold10240004400 Alkaloid H6H medium borderline
LchiScaffold11910029440 Alkaloid H6H medium borderline
LchiScaffold11910031140 Alkaloid H6H medium borderline
LchiScaffold12800037940 Alkaloid H6H low borderline
LchiScaffold1350048260 Alkaloid H6H medium borderline
LchiScaffold13920055140 Alkaloid H6H low borderline
LchiScaffold14510061390 Alkaloid H6H low borderline
LchiScaffold14810066580 Alkaloid H6H low borderline
LchiScaffold1620081310 Alkaloid H6H low borderline
LchiScaffold20840119790 Alkaloid H6H low borderline
LchiScaffold27300156890 Alkaloid H6H low borderline
LchiScaffold2900170320 Alkaloid H6H low borderline
LchiScaffold2910173840 Alkaloid H6H low borderline
LchiScaffold3040180940 Alkaloid H6H low borderline
LchiScaffold33410194630 Alkaloid H6H medium borderline
LchiScaffold34190197890 Alkaloid H6H low borderline
LchiScaffold3550207430 Alkaloid H6H medium borderline
LchiScaffold5010248200 Alkaloid H6H medium borderline
LchiScaffold5010248230 Alkaloid H6H low borderline
LchiScaffold5010248240 Alkaloid H6H medium borderline
LchiScaffold5010248280 Alkaloid H6H low borderline
LchiScaffold5010248300 Alkaloid H6H medium borderline
LchiScaffold50247130 Alkaloid H6H medium borderline
LchiScaffold50247150 Alkaloid H6H low borderline
LchiScaffold6520281260 Alkaloid H6H high pass
LchiScaffold6820285290 Alkaloid H6H medium borderline
LchiScaffold6820286850 Alkaloid H6H medium borderline
LchiScaffold7080290240 Alkaloid H6H medium borderline
LchiScaffold7080290250 Alkaloid H6H medium borderline
LchiScaffold7750307320 Alkaloid H6H medium borderline
LchiScaffold840323940 Alkaloid H6H low borderline
LchiScaffold840323950 Alkaloid H6H low borderline
LchiScaffold860326560 Alkaloid H6H low borderline