PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2261
Candidate Protein Records
2075
Pathway-Level Records
5196
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
LchiScaffold23190134080 Alkaloid MPO medium pass
LchiScaffold3220188520 Alkaloid MPO low borderline
LchiScaffold33190192270 Alkaloid MPO medium pass
LchiScaffold33190192290 Alkaloid MPO low borderline
LchiScaffold33640194930 Alkaloid MPO medium pass
LchiScaffold33640194950 Alkaloid MPO low borderline
LchiScaffold36110212170 Alkaloid MPO medium pass
LchiScaffold36110212190 Alkaloid MPO low borderline
LchiScaffold36980216060 Alkaloid MPO medium pass
LchiScaffold36980216070 Alkaloid MPO low borderline
LchiScaffold5150256650 Alkaloid MPO medium pass
LchiScaffold5300261950 Alkaloid MPO medium pass
LchiScaffold5300261960 Alkaloid MPO medium pass
LchiScaffold7230294730 Alkaloid MPO medium pass
LchiScaffold7230294740 Alkaloid MPO medium pass
LchiScaffold9560346000 Alkaloid MPO low borderline
LchiScaffold10240004380 Alkaloid NCS medium borderline
LchiScaffold10240005220 Alkaloid NCS medium borderline
LchiScaffold12210033490 Alkaloid NCS medium borderline
LchiScaffold13770053540 Alkaloid NCS medium borderline
LchiScaffold1810098810 Alkaloid NCS low borderline
LchiScaffold1810098830 Alkaloid NCS low borderline
LchiScaffold19000106780 Alkaloid NCS medium borderline
LchiScaffold20130116180 Alkaloid NCS low borderline
LchiScaffold21020121050 Alkaloid NCS low borderline
LchiScaffold2340136550 Alkaloid NCS medium borderline
LchiScaffold23780137920 Alkaloid NCS medium borderline
LchiScaffold35880211020 Alkaloid NCS medium borderline
LchiScaffold4320233350 Alkaloid NCS medium pass
LchiScaffold4650240020 Alkaloid NCS medium borderline
LchiScaffold5270261310 Alkaloid NCS medium borderline
LchiScaffold5270261330 Alkaloid NCS medium borderline
LchiScaffold5850272670 Alkaloid NCS medium borderline
LchiScaffold8050317990 Alkaloid NCS medium borderline
LchiScaffold8050318000 Alkaloid NCS medium borderline
LchiScaffold8840330040 Alkaloid NCS medium pass
LchiScaffold8840330050 Alkaloid NCS medium pass
LchiScaffold8850331590 Alkaloid NCS low borderline
LchiScaffold1000000610 Alkaloid NMT medium pass
LchiScaffold10620010520 Alkaloid NMT low borderline
LchiScaffold10880013420 Alkaloid NMT medium pass
LchiScaffold11910029500 Alkaloid NMT low borderline
LchiScaffold12190033060 Alkaloid NMT medium pass
LchiScaffold1240035320 Alkaloid NMT medium pass
LchiScaffold12920040180 Alkaloid NMT medium pass
LchiScaffold12960040910 Alkaloid NMT low borderline
LchiScaffold13330047600 Alkaloid NMT medium pass
LchiScaffold1350048580 Alkaloid NMT medium borderline
LchiScaffold14000057300 Alkaloid NMT medium pass
LchiScaffold1400056440 Alkaloid NMT low borderline