PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2261
Candidate Protein Records
2075
Pathway-Level Records
5196
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
LchiScaffold5270260910 Alkaloid T3O medium borderline
LchiScaffold5270260980 Alkaloid T3O medium borderline
LchiScaffold5270260990 Alkaloid T3O medium borderline
LchiScaffold5300262660 Alkaloid T3O medium borderline
LchiScaffold5300263330 Alkaloid T3O medium pass
LchiScaffold5300263340 Alkaloid T3O medium pass
LchiScaffold5300263350 Alkaloid T3O medium pass
LchiScaffold5300264070 Alkaloid T3O medium borderline
LchiScaffold5420265710 Alkaloid T3O medium borderline
LchiScaffold5500266410 Alkaloid T3O medium borderline
LchiScaffold5530266750 Alkaloid T3O medium borderline
LchiScaffold5620267320 Alkaloid T3O medium pass
LchiScaffold570269610 Alkaloid T3O medium borderline
LchiScaffold570269650 Alkaloid T3O medium borderline
LchiScaffold6460280970 Alkaloid T3O medium borderline
LchiScaffold6460281000 Alkaloid T3O medium borderline
LchiScaffold720293350 Alkaloid T3O low borderline
LchiScaffold7230295700 Alkaloid T3O medium pass
LchiScaffold7230296070 Alkaloid T3O medium pass
LchiScaffold7230296130 Alkaloid T3O low borderline
LchiScaffold7820311110 Alkaloid T3O medium borderline
LchiScaffold8120318960 Alkaloid T3O medium borderline
LchiScaffold8120318970 Alkaloid T3O medium borderline
LchiScaffold8470325640 Alkaloid T3O medium borderline
LchiScaffold8800328330 Alkaloid T3O medium borderline
LchiScaffold8810329100 Alkaloid T3O medium borderline
LchiScaffold8840331450 Alkaloid T3O medium pass
LchiScaffold8860332090 Alkaloid T3O medium pass
LchiScaffold8900332550 Alkaloid T3O low borderline
LchiScaffold8900332560 Alkaloid T3O medium pass
LchiScaffold8900332570 Alkaloid T3O low borderline
LchiScaffold9560346010 Alkaloid T3O medium borderline
LchiScaffold9830349680 Alkaloid T3O medium borderline
LchiScaffold2620152250 Alkaloid TDC medium borderline
LchiScaffold2620152290 Alkaloid TDC medium borderline
LchiScaffold30810181960 Alkaloid TDC low borderline
LchiScaffold1000000790 Alkaloid TRI/TRII medium pass
LchiScaffold10800012430 Alkaloid TRI/TRII medium pass
LchiScaffold11470021500 Alkaloid TRI/TRII low borderline
LchiScaffold12130032380 Alkaloid TRI/TRII medium pass
LchiScaffold12190032720 Alkaloid TRI/TRII medium pass
LchiScaffold12260034210 Alkaloid TRI/TRII medium pass
LchiScaffold12750037820 Alkaloid TRI/TRII medium pass
LchiScaffold13150046120 Alkaloid TRI/TRII medium pass
LchiScaffold13600051430 Alkaloid TRI/TRII medium pass
LchiScaffold1400056410 Alkaloid TRI/TRII low borderline
LchiScaffold14770066290 Alkaloid TRI/TRII medium pass
LchiScaffold1820099890 Alkaloid TRI/TRII medium pass
LchiScaffold19830114080 Alkaloid TRI/TRII medium pass
LchiScaffold19990114970 Alkaloid TRI/TRII medium pass