PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2261
Candidate Protein Records
2075
Pathway-Level Records
5196
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
LchiScaffold210120650 Alkaloid TYDC_DDC medium borderline
LchiScaffold260151680 Alkaloid TYDC_DDC medium borderline
LchiScaffold2620152260 Alkaloid TYDC_DDC medium borderline
LchiScaffold2620152270 Alkaloid TYDC_DDC medium borderline
LchiScaffold2620152280 Alkaloid TYDC_DDC medium borderline
LchiScaffold2620152300 Alkaloid TYDC_DDC high pass
LchiScaffold28630167830 Alkaloid TYDC_DDC medium borderline
LchiScaffold34960204910 Alkaloid TYDC_DDC medium borderline
LchiScaffold36750213690 Alkaloid TYDC_DDC low borderline
LchiScaffold3870218820 Alkaloid TYDC_DDC low borderline
LchiScaffold5800271690 Alkaloid TYDC_DDC low borderline
LchiScaffold8080318910 Alkaloid TYDC_DDC low borderline
LchiScaffold1930110040 Alkaloid XMT_MXMT_DXMT medium pass
LchiScaffold22730132520 Alkaloid XMT_MXMT_DXMT medium borderline
LchiScaffold7570302780 Alkaloid XMT_MXMT_DXMT medium borderline
LchiScaffold7570302790 Alkaloid XMT_MXMT_DXMT medium borderline
LchiScaffold7780309390 Alkaloid XMT_MXMT_DXMT medium borderline
LchiScaffold10390007170 Flavonoid 4CL low borderline
LchiScaffold10610009900 Flavonoid 4CL medium pass
LchiScaffold10990014880 Flavonoid 4CL medium pass
LchiScaffold11300018410 Flavonoid 4CL low borderline
LchiScaffold11560024060 Flavonoid 4CL low borderline
LchiScaffold12860038990 Flavonoid 4CL medium pass
LchiScaffold130041890 Flavonoid 4CL medium pass
LchiScaffold13340047750 Flavonoid 4CL medium pass
LchiScaffold1470065070 Flavonoid 4CL low borderline
LchiScaffold15570074690 Flavonoid 4CL low borderline
LchiScaffold1620081070 Flavonoid 4CL medium pass
LchiScaffold16910084600 Flavonoid 4CL medium pass
LchiScaffold17070087220 Flavonoid 4CL medium pass
LchiScaffold17070087240 Flavonoid 4CL medium pass
LchiScaffold18720103870 Flavonoid 4CL low borderline
LchiScaffold18830104670 Flavonoid 4CL low borderline
LchiScaffold20380117520 Flavonoid 4CL low borderline
LchiScaffold2110122140 Flavonoid 4CL low borderline
LchiScaffold25790148730 Flavonoid 4CL medium pass
LchiScaffold2580148740 Flavonoid 4CL medium pass
LchiScaffold26330152900 Flavonoid 4CL low borderline
LchiScaffold2740157030 Flavonoid 4CL medium pass
LchiScaffold28830168530 Flavonoid 4CL low borderline
LchiScaffold29680176080 Flavonoid 4CL medium pass
LchiScaffold320185100 Flavonoid 4CL medium pass
LchiScaffold34760202620 Flavonoid 4CL medium pass
LchiScaffold3850218230 Flavonoid 4CL medium pass
LchiScaffold3850218260 Flavonoid 4CL medium pass
LchiScaffold3960221320 Flavonoid 4CL low borderline
LchiScaffold3960221330 Flavonoid 4CL medium pass
LchiScaffold4320232910 Flavonoid 4CL medium pass
LchiScaffold4320233080 Flavonoid 4CL medium pass
LchiScaffold5020249060 Flavonoid 4CL medium pass