PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2075
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
LchiScaffold12720037400 Alkaloid 7DLGT low borderline
LchiScaffold12720037450 Alkaloid 7DLGT low borderline
LchiScaffold12860039200 Alkaloid 7DLGT low borderline
LchiScaffold12860039210 Alkaloid 7DLGT low borderline
LchiScaffold12860039260 Alkaloid 7DLGT medium pass
LchiScaffold12860039270 Alkaloid 7DLGT low borderline
LchiScaffold12860039280 Alkaloid 7DLGT medium pass
LchiScaffold12860039300 Alkaloid 7DLGT low borderline
LchiScaffold12860039310 Alkaloid 7DLGT low borderline
LchiScaffold13950055300 Alkaloid 7DLGT low borderline
LchiScaffold13950055310 Alkaloid 7DLGT low borderline
LchiScaffold13950055320 Alkaloid 7DLGT low borderline
LchiScaffold13950055330 Alkaloid 7DLGT low borderline
LchiScaffold13950055340 Alkaloid 7DLGT low borderline
LchiScaffold13950055350 Alkaloid 7DLGT low borderline
LchiScaffold1420059380 Alkaloid 7DLGT low borderline
LchiScaffold15030070000 Alkaloid 7DLGT medium pass
LchiScaffold15030070010 Alkaloid 7DLGT medium pass
LchiScaffold15030070030 Alkaloid 7DLGT medium pass
LchiScaffold15560074430 Alkaloid 7DLGT medium pass
LchiScaffold15560074450 Alkaloid 7DLGT low borderline
LchiScaffold15560074460 Alkaloid 7DLGT low borderline
LchiScaffold15560074470 Alkaloid 7DLGT low borderline
LchiScaffold15560074500 Alkaloid 7DLGT medium pass
LchiScaffold16060079420 Alkaloid 7DLGT medium pass
LchiScaffold16060079670 Alkaloid 7DLGT low borderline
LchiScaffold16060079680 Alkaloid 7DLGT medium pass
LchiScaffold16060079690 Alkaloid 7DLGT low borderline
LchiScaffold1650082230 Alkaloid 7DLGT medium pass
LchiScaffold16980085600 Alkaloid 7DLGT low borderline
LchiScaffold1780096210 Alkaloid 7DLGT medium pass
LchiScaffold1780096220 Alkaloid 7DLGT medium pass
LchiScaffold1780096230 Alkaloid 7DLGT medium pass
LchiScaffold180097570 Alkaloid 7DLGT high pass
LchiScaffold1810098570 Alkaloid 7DLGT low borderline
LchiScaffold1810098580 Alkaloid 7DLGT low borderline
LchiScaffold1810098590 Alkaloid 7DLGT medium pass
LchiScaffold18970106310 Alkaloid 7DLGT medium pass
LchiScaffold1930110200 Alkaloid 7DLGT low borderline
LchiScaffold1930110210 Alkaloid 7DLGT low borderline
LchiScaffold20190116640 Alkaloid 7DLGT low borderline
LchiScaffold20480118190 Alkaloid 7DLGT medium pass
LchiScaffold20480118200 Alkaloid 7DLGT medium pass
LchiScaffold20480118210 Alkaloid 7DLGT high pass
LchiScaffold20480118220 Alkaloid 7DLGT high pass
LchiScaffold20480118230 Alkaloid 7DLGT medium pass
LchiScaffold20480118240 Alkaloid 7DLGT medium pass
LchiScaffold2090120420 Alkaloid 7DLGT low borderline
LchiScaffold2090120470 Alkaloid 7DLGT low borderline
LchiScaffold22320129130 Alkaloid 7DLGT medium pass