PlantSME Plant secondary metabolism enzyme database

Liriodendron chinense (liriodendron_chinense)

Imported from atlas release summary for Liriodendron chinense.

2261
Candidate Protein Records
2075
Pathway-Level Records
5196
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 565 20 UGT (192) View species results
Alkaloid pathway 486 23 7DLGT (113) View species results
Phenylpropanoid pathway 418 11 POD (141) View species results
Flavonoid pathway 289 11 UFGT (181) View species results
Rosmarinic acid pathway 206 7 C4H (118) View species results
Steroid pathway 111 13 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2194 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
LchiScaffold18720103870 Phenylpropanoid 4CL low borderline
LchiScaffold18830104670 Phenylpropanoid 4CL low borderline
LchiScaffold20380117520 Phenylpropanoid 4CL low borderline
LchiScaffold2110122140 Phenylpropanoid 4CL low borderline
LchiScaffold25790148730 Phenylpropanoid 4CL medium pass
LchiScaffold2580148740 Phenylpropanoid 4CL medium pass
LchiScaffold26330152900 Phenylpropanoid 4CL low borderline
LchiScaffold2740157030 Phenylpropanoid 4CL medium pass
LchiScaffold28830168530 Phenylpropanoid 4CL low borderline
LchiScaffold29680176080 Phenylpropanoid 4CL medium pass
LchiScaffold320185100 Phenylpropanoid 4CL medium pass
LchiScaffold34760202620 Phenylpropanoid 4CL medium pass
LchiScaffold3850218230 Phenylpropanoid 4CL medium pass
LchiScaffold3850218260 Phenylpropanoid 4CL medium pass
LchiScaffold3960221320 Phenylpropanoid 4CL low borderline
LchiScaffold3960221330 Phenylpropanoid 4CL medium pass
LchiScaffold4320232910 Phenylpropanoid 4CL medium pass
LchiScaffold4320233080 Phenylpropanoid 4CL medium pass
LchiScaffold5020249060 Phenylpropanoid 4CL medium pass
LchiScaffold5020249070 Phenylpropanoid 4CL medium pass
LchiScaffold5020249090 Phenylpropanoid 4CL medium pass
LchiScaffold5850271950 Phenylpropanoid 4CL medium pass
LchiScaffold5850271960 Phenylpropanoid 4CL medium pass
LchiScaffold5850272230 Phenylpropanoid 4CL medium pass
LchiScaffold5850272240 Phenylpropanoid 4CL medium pass
LchiScaffold5850272260 Phenylpropanoid 4CL medium pass
LchiScaffold6820284890 Phenylpropanoid 4CL low borderline
LchiScaffold7230298230 Phenylpropanoid 4CL low borderline
LchiScaffold7640304270 Phenylpropanoid 4CL medium pass
LchiScaffold7830311430 Phenylpropanoid 4CL medium pass
LchiScaffold8360322810 Phenylpropanoid 4CL medium pass
LchiScaffold9150335990 Phenylpropanoid 4CL low borderline
LchiScaffold9150336930 Phenylpropanoid 4CL medium pass
LchiScaffold9150338560 Phenylpropanoid 4CL low borderline
LchiScaffold9640348000 Phenylpropanoid 4CL low borderline
LchiScaffold980349070 Phenylpropanoid 4CL low borderline
LchiScaffold1000000170 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold10150003490 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold10150003510 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold10240004490 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold10350006690 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold1040007440 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold1040007510 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold1040007530 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold10430008050 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold10430008060 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold10430008150 Phenylpropanoid C3'H/CYP98A high pass
LchiScaffold10430008190 Phenylpropanoid C3'H/CYP98A medium borderline
LchiScaffold10430008370 Phenylpropanoid C3'H/CYP98A low borderline
LchiScaffold10430008380 Phenylpropanoid C3'H/CYP98A low borderline