PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

2701
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Mtru01G0017740.1 Alkaloid 16OMT medium borderline
Mtru01G0017760.1 Alkaloid 16OMT medium borderline
Mtru01G0017770.1 Alkaloid 16OMT medium borderline
Mtru01G0041750.1 Alkaloid 16OMT medium borderline
Mtru01G0041760.1 Alkaloid 16OMT medium borderline
Mtru02G0010570.1 Alkaloid 16OMT low borderline
Mtru03G0007780.1 Alkaloid 16OMT medium borderline
Mtru03G0043260.1 Alkaloid 16OMT medium borderline
Mtru03G0049690.1 Alkaloid 16OMT medium borderline
Mtru04G0014810.1 Alkaloid 16OMT medium borderline
Mtru04G0014840.1 Alkaloid 16OMT medium borderline
Mtru04G0014870.1 Alkaloid 16OMT medium borderline
Mtru04G0014890.1 Alkaloid 16OMT medium borderline
Mtru04G0014910.1 Alkaloid 16OMT medium borderline
Mtru04G0019380.1 Alkaloid 16OMT medium borderline
Mtru04G0038090.1 Alkaloid 16OMT medium borderline
Mtru04G0043730.1 Alkaloid 16OMT medium borderline
Mtru04G0043750.1 Alkaloid 16OMT medium borderline
Mtru04G0043910.1 Alkaloid 16OMT medium borderline
Mtru04G0043920.1 Alkaloid 16OMT medium borderline
Mtru05G0040610.1 Alkaloid 16OMT medium borderline
Mtru05G0040650.1 Alkaloid 16OMT medium borderline
Mtru05G0040660.1 Alkaloid 16OMT medium borderline
Mtru05G0040670.1 Alkaloid 16OMT medium borderline
Mtru05G0040710.1 Alkaloid 16OMT medium borderline
Mtru05G0057410.1 Alkaloid 16OMT medium borderline
Mtru07G0004170.1 Alkaloid 16OMT medium borderline
Mtru07G0005080.1 Alkaloid 16OMT medium borderline
Mtru07G0005100.1 Alkaloid 16OMT medium borderline
Mtru07G0009780.1 Alkaloid 16OMT medium borderline
Mtru07G0009790.1 Alkaloid 16OMT medium borderline
Mtru07G0062020.1 Alkaloid 16OMT medium borderline
Mtru07G0062040.1 Alkaloid 16OMT medium borderline
Mtru08G0012000.1 Alkaloid 16OMT medium borderline
Mtru08G0034420.1 Alkaloid 16OMT medium borderline
Mtru08G0034440.1 Alkaloid 16OMT medium borderline
Mtruscaffold00170003340.1 Alkaloid 16OMT medium borderline
Mtruscaffold00790008530.1 Alkaloid 16OMT medium borderline
Mtruscaffold05910019280.1 Alkaloid 16OMT medium borderline
Mtruscaffold07940021010.1 Alkaloid 16OMT medium borderline
Mtru04G0011360.1 Alkaloid 6OMT_4OMT_SOMT medium borderline
Mtru01G0007560.1 Alkaloid 7DLGT high pass
Mtru01G0007570.1 Alkaloid 7DLGT high pass
Mtru01G0013590.1 Alkaloid 7DLGT low borderline
Mtru01G0015410.1 Alkaloid 7DLGT medium pass
Mtru01G0019560.1 Alkaloid 7DLGT medium pass
Mtru01G0033000.1 Alkaloid 7DLGT low borderline
Mtru01G0049990.1 Alkaloid 7DLGT low borderline
Mtru01G0050000.1 Alkaloid 7DLGT low borderline
Mtru01G0061010.1 Alkaloid 7DLGT low borderline