PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

2701
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: RAS
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Gene Pathway Family Confidence Status
Mtru01G0019520.1 Rosmarinic Acid RAS low borderline
Mtru01G0023140.1 Rosmarinic Acid RAS low borderline
Mtru01G0027920.1 Rosmarinic Acid RAS medium pass
Mtru01G0044430.1 Rosmarinic Acid RAS medium pass
Mtru02G0034700.1 Rosmarinic Acid RAS medium pass
Mtru02G0049400.1 Rosmarinic Acid RAS low borderline
Mtru02G0058290.1 Rosmarinic Acid RAS medium pass
Mtru03G0009920.1 Rosmarinic Acid RAS medium pass
Mtru03G0019050.1 Rosmarinic Acid RAS medium pass
Mtru03G0028830.1 Rosmarinic Acid RAS medium pass
Mtru03G0028860.1 Rosmarinic Acid RAS medium pass
Mtru03G0028880.1 Rosmarinic Acid RAS low borderline
Mtru03G0028890.1 Rosmarinic Acid RAS medium pass
Mtru03G0028900.1 Rosmarinic Acid RAS low borderline
Mtru03G0028910.1 Rosmarinic Acid RAS low borderline
Mtru03G0035200.1 Rosmarinic Acid RAS low borderline
Mtru03G0039590.1 Rosmarinic Acid RAS low borderline
Mtru03G0039590.2 Rosmarinic Acid RAS low borderline
Mtru03G0063590.1 Rosmarinic Acid RAS medium pass
Mtru04G0001390.1 Rosmarinic Acid RAS medium pass
Mtru04G0001440.1 Rosmarinic Acid RAS medium pass
Mtru04G0001440.2 Rosmarinic Acid RAS medium pass
Mtru04G0004670.1 Rosmarinic Acid RAS medium pass
Mtru04G0023760.1 Rosmarinic Acid RAS low borderline
Mtru04G0034250.1 Rosmarinic Acid RAS low borderline
Mtru04G0043550.1 Rosmarinic Acid RAS low borderline
Mtru04G0050680.1 Rosmarinic Acid RAS medium pass
Mtru04G0067970.1 Rosmarinic Acid RAS medium pass
Mtru05G0012780.1 Rosmarinic Acid RAS low borderline
Mtru05G0012780.2 Rosmarinic Acid RAS low borderline
Mtru05G0012780.3 Rosmarinic Acid RAS low borderline
Mtru05G0042080.1 Rosmarinic Acid RAS medium pass
Mtru06G0006520.1 Rosmarinic Acid RAS low borderline
Mtru06G0036080.1 Rosmarinic Acid RAS low borderline
Mtru07G0020720.1 Rosmarinic Acid RAS low borderline
Mtru07G0039030.1 Rosmarinic Acid RAS medium pass
Mtru07G0039040.1 Rosmarinic Acid RAS medium pass
Mtru07G0039710.1 Rosmarinic Acid RAS medium pass
Mtru07G0039730.1 Rosmarinic Acid RAS medium pass
Mtru07G0039750.1 Rosmarinic Acid RAS medium pass
Mtru07G0039760.1 Rosmarinic Acid RAS medium pass
Mtru07G0056480.1 Rosmarinic Acid RAS low borderline
Mtru07G0059280.1 Rosmarinic Acid RAS medium pass
Mtru08G0019540.1 Rosmarinic Acid RAS medium pass
Mtru08G0023650.1 Rosmarinic Acid RAS low borderline
Mtru08G0038540.1 Rosmarinic Acid RAS low borderline
Mtru08G0038820.1 Rosmarinic Acid RAS medium pass
Mtru08G0050870.1 Rosmarinic Acid RAS medium pass