PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

2701
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
Mtru01G0005220.1 Alkaloid IO medium borderline
Mtru01G0008590.1 Alkaloid IO low borderline
Mtru01G0014860.1 Alkaloid IO medium borderline
Mtru01G0054200.1 Alkaloid IO medium borderline
Mtru01G0066800.1 Alkaloid IO medium borderline
Mtru02G0033850.1 Alkaloid IO low borderline
Mtru03G0009150.1 Alkaloid IO medium borderline
Mtru03G0009160.1 Alkaloid IO medium borderline
Mtru03G0014150.1 Alkaloid IO medium borderline
Mtru03G0029670.1 Alkaloid IO medium borderline
Mtru03G0041290.1 Alkaloid IO low borderline
Mtru03G0057540.1 Alkaloid IO medium borderline
Mtru03G0057540.2 Alkaloid IO medium borderline
Mtru04G0011440.1 Alkaloid IO low borderline
Mtru04G0027550.1 Alkaloid IO medium borderline
Mtru04G0043710.1 Alkaloid IO medium borderline
Mtru04G0049550.1 Alkaloid IO medium borderline
Mtru04G0049560.1 Alkaloid IO medium borderline
Mtru04G0053360.1 Alkaloid IO medium borderline
Mtru05G0008620.1 Alkaloid IO medium borderline
Mtru06G0027370.1 Alkaloid IO medium borderline
Mtru06G0027370.2 Alkaloid IO medium borderline
Mtru07G0051660.1 Alkaloid IO medium borderline
Mtru08G0000750.1 Alkaloid IO medium borderline
Mtru08G0007740.2 Alkaloid IO low borderline
Mtru08G0017660.1 Alkaloid IO medium borderline
Mtru08G0039710.3 Alkaloid IO low borderline
Mtru08G0039710.4 Alkaloid IO low borderline
Mtru08G0045970.2 Alkaloid IO low borderline
Mtru08G0053590.2 Alkaloid IO low borderline
Mtruscaffold17500024550.1 Alkaloid IO medium borderline