PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

2701
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F5H/CYP84A
Reset
Gene Pathway Family Confidence Status
Mtru01G0015710.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru01G0051030.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru02G0003360.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru02G0007260.1 Phenylpropanoid F5H/CYP84A low borderline
Mtru03G0006730.1 Phenylpropanoid F5H/CYP84A low borderline
Mtru03G0006740.1 Phenylpropanoid F5H/CYP84A low borderline
Mtru03G0029710.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru03G0029730.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru03G0029760.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru03G0038500.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru03G0039030.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru04G0000120.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru04G0011560.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru04G0033040.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru04G0037250.1 Phenylpropanoid F5H/CYP84A low borderline
Mtru04G0072320.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru05G0007690.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru05G0021020.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru05G0038320.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru05G0038470.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru06G0015540.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru08G0000750.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru08G0000770.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru08G0005800.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru08G0039710.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru08G0048470.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtru08G0055520.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtruscaffold01710012260.1 Phenylpropanoid F5H/CYP84A medium borderline
Mtruscaffold12620023090.1 Phenylpropanoid F5H/CYP84A low borderline