PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

2701
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DFR
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Gene Pathway Family Confidence Status
Mtru01G0044100.1 Flavonoid DFR medium borderline
Mtru01G0044100.2 Flavonoid DFR medium borderline
Mtru02G0015130.1 Flavonoid DFR medium borderline
Mtru02G0015130.2 Flavonoid DFR medium borderline
Mtru02G0058050.1 Flavonoid DFR medium borderline
Mtru03G0000120.2 Flavonoid DFR medium borderline
Mtru03G0003560.1 Flavonoid DFR medium borderline
Mtru04G0001060.1 Flavonoid DFR medium borderline
Mtru04G0001060.2 Flavonoid DFR medium borderline
Mtru04G0001060.3 Flavonoid DFR medium borderline
Mtru04G0002380.1 Flavonoid DFR medium borderline
Mtru04G0002380.2 Flavonoid DFR medium borderline
Mtru04G0002380.3 Flavonoid DFR medium borderline
Mtru04G0002680.1 Flavonoid DFR medium borderline
Mtru04G0002680.2 Flavonoid DFR medium borderline
Mtru04G0036580.1 Flavonoid DFR medium borderline
Mtru07G0031810.1 Flavonoid DFR medium borderline
Mtru07G0059750.1 Flavonoid DFR medium borderline
Mtru07G0059750.2 Flavonoid DFR medium borderline
Mtru07G0059750.3 Flavonoid DFR low borderline
Mtru07G0061020.4 Flavonoid DFR low borderline
Mtru08G0030570.2 Flavonoid DFR medium borderline
Mtru08G0030570.3 Flavonoid DFR medium borderline
Mtru08G0030570.8 Flavonoid DFR medium borderline
Mtru08G0030970.1 Flavonoid DFR medium borderline