PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

2701
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BBE
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Gene Pathway Family Confidence Status
Mtru01G0041650.1 Alkaloid BBE medium borderline
Mtru02G0012150.1 Alkaloid BBE medium borderline
Mtru02G0016600.1 Alkaloid BBE medium borderline
Mtru02G0016630.1 Alkaloid BBE medium borderline
Mtru02G0016660.1 Alkaloid BBE medium borderline
Mtru02G0016670.1 Alkaloid BBE medium borderline
Mtru02G0016690.1 Alkaloid BBE medium borderline
Mtru02G0016730.1 Alkaloid BBE medium borderline
Mtru02G0016750.1 Alkaloid BBE medium borderline
Mtru02G0016760.1 Alkaloid BBE medium borderline
Mtru02G0044550.1 Alkaloid BBE medium borderline
Mtru02G0044590.1 Alkaloid BBE medium borderline
Mtru03G0002740.1 Alkaloid BBE medium borderline
Mtru03G0002750.1 Alkaloid BBE medium borderline
Mtru03G0002760.1 Alkaloid BBE medium borderline
Mtru03G0002770.1 Alkaloid BBE medium borderline
Mtru04G0025430.1 Alkaloid BBE medium borderline
Mtru04G0043940.1 Alkaloid BBE medium borderline
Mtru04G0045570.1 Alkaloid BBE medium borderline
Mtru04G0045590.1 Alkaloid BBE medium borderline
Mtru04G0045600.1 Alkaloid BBE medium borderline
Mtru04G0045610.1 Alkaloid BBE medium borderline
Mtru04G0048200.1 Alkaloid BBE medium borderline
Mtru04G0048380.1 Alkaloid BBE medium borderline
Mtru04G0048390.1 Alkaloid BBE medium borderline
Mtru04G0048400.1 Alkaloid BBE medium borderline
Mtru04G0048410.1 Alkaloid BBE medium borderline
Mtru04G0048420.1 Alkaloid BBE medium borderline
Mtru04G0048430.1 Alkaloid BBE medium borderline
Mtru04G0048500.1 Alkaloid BBE low borderline
Mtru04G0048510.1 Alkaloid BBE medium borderline
Mtru04G0048520.1 Alkaloid BBE medium borderline
Mtru06G0009020.1 Alkaloid BBE medium borderline
Mtru07G0054020.2 Alkaloid BBE low borderline
Mtru08G0030670.1 Alkaloid BBE medium borderline