PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

2701
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CPR
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Gene Pathway Family Confidence Status Best Target
Mtru01G0058090.1 Rosmarinic Acid CPR low borderline CPR__00003__sp_C5YJG8_NCPR_SORBI
Mtru01G0058090.2 Rosmarinic Acid CPR low borderline CPR__00003__sp_C5YJG8_NCPR_SORBI
Mtru01G0058090.3 Rosmarinic Acid CPR low borderline CPR__00003__sp_C5YJG8_NCPR_SORBI
Mtru01G0058090.4 Rosmarinic Acid CPR low borderline CPR__00003__sp_C5YJG8_NCPR_SORBI
Mtru01G0058090.5 Rosmarinic Acid CPR low borderline CPR__00003__sp_C5YJG8_NCPR_SORBI
Mtru01G0058090.6 Rosmarinic Acid CPR low borderline CPR__00003__sp_C5YJG8_NCPR_SORBI
Mtru01G0058090.7 Rosmarinic Acid CPR low borderline CPR__00003__sp_C5YJG8_NCPR_SORBI
Mtru01G0060020.1 Rosmarinic Acid CPR low borderline CPR__00007__sp_Q96327_EBP1_ARATH
Mtru01G0060020.2 Rosmarinic Acid CPR low borderline CPR__00007__sp_Q96327_EBP1_ARATH
Mtru01G0060020.3 Rosmarinic Acid CPR low borderline CPR__00007__sp_Q96327_EBP1_ARATH
Mtru02G0040810.1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
Mtru03G0054650.1 Rosmarinic Acid CPR medium pass CPR__00008__sp_Q9SB48_NCPR1_ARATH
Mtru04G0057330.1 Rosmarinic Acid CPR low borderline CPR__00007__sp_Q96327_EBP1_ARATH
Mtru04G0068290.1 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
Mtru05G0012540.1 Rosmarinic Acid CPR medium pass CPR__00001__sp_A0A2U1LIM9_NCPR1_ARTAN
Mtru05G0012540.2 Rosmarinic Acid CPR low borderline CPR__00001__sp_A0A2U1LIM9_NCPR1_ARTAN
Mtru07G0001130.1 Rosmarinic Acid CPR low borderline CPR__00001__sp_A0A2U1LIM9_NCPR1_ARTAN
Mtru07G0028450.1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
Mtru07G0050300.1 Rosmarinic Acid CPR low borderline CPR__00004__sp_Q0J705_NCPR2_ORYSJ