PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

2701
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
Mtru01G0051490.1 Alkaloid T16H medium borderline
Mtru01G0063270.1 Alkaloid T16H medium borderline
Mtru02G0003370.1 Alkaloid T16H medium borderline
Mtru03G0007390.1 Alkaloid T16H medium borderline
Mtru03G0014190.1 Alkaloid T16H medium borderline
Mtru03G0023800.1 Alkaloid T16H medium borderline
Mtru04G0011560.1 Alkaloid T16H medium pass
Mtru04G0011620.1 Alkaloid T16H medium borderline
Mtru04G0027580.1 Alkaloid T16H medium borderline
Mtru04G0033040.1 Alkaloid T16H medium borderline
Mtru04G0044950.1 Alkaloid T16H medium borderline
Mtru04G0044960.1 Alkaloid T16H medium borderline
Mtru04G0045000.1 Alkaloid T16H medium borderline
Mtru04G0054660.1 Alkaloid T16H medium borderline
Mtru04G0054670.1 Alkaloid T16H medium borderline
Mtru04G0054700.1 Alkaloid T16H medium borderline
Mtru05G0003450.2 Alkaloid T16H low borderline
Mtru05G0003450.4 Alkaloid T16H low borderline
Mtru05G0007690.1 Alkaloid T16H medium borderline
Mtru05G0038350.1 Alkaloid T16H medium borderline
Mtru05G0038400.1 Alkaloid T16H medium borderline
Mtru05G0039490.1 Alkaloid T16H low borderline
Mtru05G0041230.1 Alkaloid T16H medium borderline
Mtru05G0054830.1 Alkaloid T16H medium borderline
Mtru05G0054920.1 Alkaloid T16H medium pass
Mtru06G0003120.1 Alkaloid T16H medium borderline
Mtru06G0015630.1 Alkaloid T16H medium borderline
Mtru06G0034650.1 Alkaloid T16H medium borderline
Mtru07G0035140.3 Alkaloid T16H low borderline
Mtru07G0040840.1 Alkaloid T16H medium borderline
Mtru07G0044450.1 Alkaloid T16H medium borderline
Mtru08G0000240.1 Alkaloid T16H low borderline
Mtru08G0000770.1 Alkaloid T16H medium borderline
Mtru08G0007130.1 Alkaloid T16H medium borderline
Mtru08G0007740.1 Alkaloid T16H medium borderline
Mtru08G0039710.1 Alkaloid T16H medium borderline
Mtru08G0039710.2 Alkaloid T16H medium borderline
Mtru08G0048470.1 Alkaloid T16H medium borderline
Mtruscaffold01550011830.1 Alkaloid T16H medium borderline
Mtruscaffold06080019430.1 Alkaloid T16H medium borderline
Mtruscaffold06080019450.1 Alkaloid T16H medium borderline