PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

2701
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SLS
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Gene Pathway Family Confidence Status
Mtru01G0008900.1 Alkaloid SLS medium borderline
Mtru01G0032900.1 Alkaloid SLS medium borderline
Mtru01G0047130.1 Alkaloid SLS medium borderline
Mtru01G0057510.1 Alkaloid SLS medium borderline
Mtru01G0057520.1 Alkaloid SLS medium borderline
Mtru02G0012210.1 Alkaloid SLS medium borderline
Mtru02G0030680.2 Alkaloid SLS medium borderline
Mtru02G0030740.1 Alkaloid SLS low borderline
Mtru02G0033840.1 Alkaloid SLS low borderline
Mtru02G0037990.1 Alkaloid SLS medium borderline
Mtru02G0038000.1 Alkaloid SLS medium borderline
Mtru02G0038030.2 Alkaloid SLS medium borderline
Mtru02G0038070.1 Alkaloid SLS medium borderline
Mtru02G0045340.1 Alkaloid SLS medium borderline
Mtru02G0058310.1 Alkaloid SLS medium borderline
Mtru03G0030560.1 Alkaloid SLS medium borderline
Mtru04G0014170.1 Alkaloid SLS medium borderline
Mtru04G0014170.2 Alkaloid SLS medium borderline
Mtru04G0014170.3 Alkaloid SLS medium borderline
Mtru04G0054900.1 Alkaloid SLS low borderline
Mtru04G0059360.1 Alkaloid SLS medium borderline
Mtru06G0000520.1 Alkaloid SLS low borderline
Mtru06G0009170.1 Alkaloid SLS medium borderline
Mtru07G0001140.1 Alkaloid SLS low borderline
Mtru07G0001380.2 Alkaloid SLS medium borderline
Mtru07G0020360.1 Alkaloid SLS medium borderline
Mtru07G0020360.2 Alkaloid SLS medium borderline
Mtru08G0017240.1 Alkaloid SLS medium borderline
Mtru08G0017240.2 Alkaloid SLS medium borderline
Mtru08G0017300.1 Alkaloid SLS medium borderline
Mtru08G0017310.1 Alkaloid SLS medium borderline
Mtru08G0017320.1 Alkaloid SLS medium borderline
Mtru08G0017330.1 Alkaloid SLS medium borderline
Mtru08G0017330.2 Alkaloid SLS medium borderline
Mtru08G0017340.1 Alkaloid SLS medium borderline
Mtru08G0017350.1 Alkaloid SLS medium borderline
Mtru08G0020710.1 Alkaloid SLS medium borderline
Mtru08G0020720.1 Alkaloid SLS medium borderline
Mtru08G0020730.1 Alkaloid SLS medium borderline
Mtru08G0020730.2 Alkaloid SLS medium borderline
Mtru08G0029710.1 Alkaloid SLS medium borderline
Mtruscaffold01470011440.1 Alkaloid SLS medium borderline