PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

2701
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
Mtru01G0011170.1 Alkaloid GS high pass
Mtru01G0061250.1 Alkaloid GS high pass
Mtru01G0061250.2 Alkaloid GS high pass
Mtru02G0003020.1 Alkaloid GS high pass
Mtru02G0003030.1 Alkaloid GS medium pass
Mtru02G0004640.1 Alkaloid GS low borderline
Mtru02G0004640.2 Alkaloid GS low borderline
Mtru02G0004680.3 Alkaloid GS low borderline
Mtru02G0040970.1 Alkaloid GS low borderline
Mtru03G0050190.1 Alkaloid GS low borderline
Mtru04G0013320.1 Alkaloid GS low borderline
Mtru04G0014790.1 Alkaloid GS low borderline
Mtru04G0014920.1 Alkaloid GS low borderline
Mtru04G0015200.1 Alkaloid GS low borderline
Mtru04G0015260.1 Alkaloid GS low borderline
Mtru04G0020980.1 Alkaloid GS low borderline
Mtru04G0042510.3 Alkaloid GS low borderline
Mtru04G0060450.1 Alkaloid GS high pass
Mtru05G0018610.1 Alkaloid GS high pass
Mtru05G0018620.1 Alkaloid GS high pass
Mtru05G0018630.1 Alkaloid GS high pass
Mtru05G0018650.1 Alkaloid GS high pass
Mtru05G0018660.1 Alkaloid GS high pass
Mtru05G0018660.2 Alkaloid GS high pass
Mtru05G0018680.1 Alkaloid GS medium pass
Mtru05G0018690.1 Alkaloid GS high pass
Mtru05G0018700.1 Alkaloid GS high pass
Mtru05G0018710.1 Alkaloid GS high pass
Mtru05G0018720.1 Alkaloid GS high pass
Mtru05G0018730.1 Alkaloid GS low borderline
Mtru05G0018740.1 Alkaloid GS high pass
Mtru05G0018770.1 Alkaloid GS high pass
Mtru06G0004610.1 Alkaloid GS low borderline
Mtru06G0004620.1 Alkaloid GS low borderline
Mtru06G0025800.1 Alkaloid GS medium pass
Mtru06G0025800.2 Alkaloid GS medium pass
Mtru06G0026260.1 Alkaloid GS medium pass
Mtru07G0014950.1 Alkaloid GS low borderline
Mtru07G0014950.2 Alkaloid GS low borderline
Mtru07G0020310.1 Alkaloid GS low borderline
Mtru08G0017210.1 Alkaloid GS low borderline
Mtru08G0017370.1 Alkaloid GS low borderline
Mtru08G0032240.1 Alkaloid GS low borderline
Mtru08G0034070.1 Alkaloid GS high pass
Mtru08G0048340.1 Alkaloid GS high pass
Mtru08G0049910.1 Alkaloid GS medium pass
Mtru08G0049910.2 Alkaloid GS medium pass
Mtru08G0049910.3 Alkaloid GS medium pass
Mtruscaffold12770023130.1 Alkaloid GS medium pass
Mtruscaffold13190023300.1 Alkaloid GS low borderline