PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

2701
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COR
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Gene Pathway Family Confidence Status Best Target
Mtru03G0042870.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Mtru04G0009170.1 Alkaloid COR medium pass COR__00001__sp_B9VRJ2_COR15_PAPSO
Mtru04G0009170.2 Alkaloid COR medium pass COR__00001__sp_B9VRJ2_COR15_PAPSO
Mtru04G0009220.1 Alkaloid COR medium pass COR__00003__sp_Q9SQ68_COR13_PAPSO
Mtru04G0009220.2 Alkaloid COR medium pass COR__00003__sp_Q9SQ68_COR13_PAPSO
Mtru04G0009220.3 Alkaloid COR medium pass COR__00003__sp_Q9SQ68_COR13_PAPSO
Mtru04G0009230.1 Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
Mtru04G0009240.1 Alkaloid COR medium pass COR__00001__sp_B9VRJ2_COR15_PAPSO
Mtru04G0009240.2 Alkaloid COR medium pass COR__00001__sp_B9VRJ2_COR15_PAPSO
Mtru04G0009240.3 Alkaloid COR medium pass COR__00001__sp_B9VRJ2_COR15_PAPSO
Mtru04G0009240.4 Alkaloid COR medium pass COR__00001__sp_B9VRJ2_COR15_PAPSO
Mtru04G0009240.5 Alkaloid COR medium pass COR__00001__sp_B9VRJ2_COR15_PAPSO
Mtru04G0016920.1 Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
Mtru04G0033500.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Mtru04G0033530.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Mtru04G0033540.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Mtru05G0057250.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Mtru05G0057260.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Mtru05G0057270.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Mtru06G0029400.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Mtru06G0029410.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Mtru06G0029420.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Mtru06G0029590.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Mtru07G0025480.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
Mtru07G0029220.1 Alkaloid COR medium pass COR__00001__sp_B9VRJ2_COR15_PAPSO
Mtru07G0029220.2 Alkaloid COR medium pass COR__00001__sp_B9VRJ2_COR15_PAPSO
Mtru08G0035740.1 Alkaloid COR medium pass COR__00003__sp_Q9SQ68_COR13_PAPSO
Mtru08G0035760.1 Alkaloid COR medium pass COR__00001__sp_B9VRJ2_COR15_PAPSO
Mtruscaffold03740016590.1 Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO