PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

3238
Candidate Protein Records
2701
Pathway-Level Records
6792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Mtru05G0054970.1 Steroid CYP90D1 low borderline
Mtru05G0055280.1 Steroid CYP90D1 low borderline
Mtru05G0055310.1 Steroid CYP90D1 low borderline
Mtru06G0015620.1 Steroid CYP90D1 low borderline
Mtru06G0018240.1 Steroid CYP90D1 low borderline
Mtru06G0018270.1 Steroid CYP90D1 low borderline
Mtru06G0034650.1 Steroid CYP90D1 low borderline
Mtru07G0020360.1 Steroid CYP90D1 low borderline
Mtru07G0020360.2 Steroid CYP90D1 low borderline
Mtru07G0032200.1 Steroid CYP90D1 low borderline
Mtru07G0035140.1 Steroid CYP90D1 medium borderline
Mtru07G0035140.2 Steroid CYP90D1 medium borderline
Mtru08G0002280.1 Steroid CYP90D1 low borderline
Mtru08G0005220.1 Steroid CYP90D1 low borderline
Mtru08G0007130.1 Steroid CYP90D1 low borderline
Mtru08G0007740.1 Steroid CYP90D1 medium borderline
Mtru08G0007740.2 Steroid CYP90D1 medium borderline
Mtru08G0010270.1 Steroid CYP90D1 low borderline
Mtru08G0010280.1 Steroid CYP90D1 low borderline
Mtru08G0010290.1 Steroid CYP90D1 low borderline
Mtru08G0017660.1 Steroid CYP90D1 low borderline
Mtru08G0023010.1 Steroid CYP90D1 low borderline
Mtru08G0023040.1 Steroid CYP90D1 low borderline
Mtru08G0029710.1 Steroid CYP90D1 low borderline
Mtru08G0055510.1 Steroid CYP90D1 low borderline
Mtru08G0055530.1 Steroid CYP90D1 low borderline
Mtruscaffold00220003990.1 Steroid CYP90D1 low borderline
Mtruscaffold00450006390.1 Steroid CYP90D1 medium borderline
Mtruscaffold01470011440.1 Steroid CYP90D1 low borderline
Mtruscaffold05540018910.1 Steroid CYP90D1 low borderline
Mtruscaffold06080019430.1 Steroid CYP90D1 low borderline
Mtru04G0028520.1 Steroid DET2 medium pass
Mtru05G0007920.1 Steroid DET2 low borderline
Mtru05G0049340.1 Steroid DET2 low borderline
Mtru06G0016350.1 Steroid DET2 low borderline
Mtru06G0016410.1 Steroid DET2 low borderline
Mtru07G0027060.1 Steroid DET2 medium pass
Mtru08G0057370.1 Steroid DET2 low borderline
Mtru08G0057370.2 Steroid DET2 medium borderline
Mtru08G0057370.3 Steroid DET2 medium borderline
Mtru02G0020780.1 Steroid DWF1 low borderline
Mtru04G0034990.1 Steroid DWF1 medium pass
Mtru04G0034990.2 Steroid DWF1 medium pass
Mtru06G0027220.1 Steroid DWF1 low borderline
Mtru06G0033030.1 Steroid DWF1 low borderline
Mtru01G0010110.1 Steroid DWF4/CYP90B1 low borderline
Mtru01G0010130.1 Steroid DWF4/CYP90B1 low borderline
Mtru01G0010140.1 Steroid DWF4/CYP90B1 low borderline
Mtru01G0016910.1 Steroid DWF4/CYP90B1 low borderline
Mtru01G0018920.1 Steroid DWF4/CYP90B1 medium borderline