PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

3238
Candidate Protein Records
2701
Pathway-Level Records
6792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Mtru08G0057640.1 Steroid SMT1/SMT2/SMT3 low borderline
Mtru08G0057640.2 Steroid SMT1/SMT2/SMT3 low borderline
Mtru08G0057640.3 Steroid SMT1/SMT2/SMT3 low borderline
Mtru08G0057640.4 Steroid SMT1/SMT2/SMT3 low borderline
Mtruscaffold00030001160.1 Steroid SMT1/SMT2/SMT3 medium pass
Mtruscaffold00030001160.2 Steroid SMT1/SMT2/SMT3 medium pass
Mtruscaffold00750008370.1 Steroid SMT1/SMT2/SMT3 low borderline
Mtru01G0006160.1 Steroid SQE medium pass
Mtru01G0006160.2 Steroid SQE medium pass
Mtru02G0011740.1 Steroid SQE low borderline
Mtru03G0057010.1 Steroid SQE medium pass
Mtru03G0057010.2 Steroid SQE medium pass
Mtru03G0060710.1 Steroid SQE low borderline
Mtru04G0046500.1 Steroid SQE medium pass
Mtru05G0018410.1 Steroid SQE low borderline
Mtru06G0015520.1 Steroid SQE medium pass
Mtru06G0015610.1 Steroid SQE medium pass
Mtru07G0025880.1 Steroid SQE low borderline
Mtru03G0018350.1 Steroid SQS/FDFT1 medium pass
Mtru03G0043270.1 Steroid SQS/FDFT1 low borderline
Mtru04G0032970.1 Steroid SQS/FDFT1 high pass
Mtru04G0065440.1 Steroid SQS/FDFT1 low borderline
Mtru05G0005780.1 Steroid SQS/FDFT1 low borderline
Mtru05G0034630.1 Steroid SQS/FDFT1 low borderline
Mtru05G0042020.1 Steroid SQS/FDFT1 medium pass
Mtru05G0042020.2 Steroid SQS/FDFT1 medium pass
Mtru05G0042020.3 Steroid SQS/FDFT1 medium pass
Mtru05G0042020.4 Steroid SQS/FDFT1 medium pass
Mtru05G0042020.5 Steroid SQS/FDFT1 medium pass
Mtru05G0042020.6 Steroid SQS/FDFT1 medium pass
Mtru05G0042020.7 Steroid SQS/FDFT1 medium pass
Mtru05G0051810.1 Steroid SQS/FDFT1 medium pass
Mtru08G0012710.1 Steroid SQS/FDFT1 low borderline
Mtru01G0023440.1 Terpenoid AACT medium borderline
Mtru01G0036140.1 Terpenoid AACT low borderline
Mtru01G0036140.2 Terpenoid AACT low borderline
Mtru04G0009790.1 Terpenoid AACT medium borderline
Mtru04G0072540.1 Terpenoid AACT medium borderline
Mtru04G0072540.2 Terpenoid AACT medium borderline
Mtru04G0072540.3 Terpenoid AACT medium pass
Mtru05G0057510.1 Terpenoid AACT medium borderline
Mtru05G0057510.2 Terpenoid AACT medium borderline
Mtru05G0057510.3 Terpenoid AACT medium borderline
Mtru05G0057510.4 Terpenoid AACT medium borderline
Mtruscaffold04490017780.1 Terpenoid AACT medium borderline
Mtruscaffold08370021260.1 Terpenoid AACT low borderline
Mtru01G0001070.1 Terpenoid BAHD medium pass
Mtru01G0001070.2 Terpenoid BAHD medium pass
Mtru01G0001070.3 Terpenoid BAHD medium pass
Mtru01G0001070.4 Terpenoid BAHD medium pass