PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

3238
Candidate Protein Records
2701
Pathway-Level Records
6792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Mtru04G0070760.1 Alkaloid CYP719 medium borderline
Mtru05G0010490.1 Alkaloid CYP719 medium borderline
Mtru05G0030710.1 Alkaloid CYP719 low borderline
Mtru05G0052600.1 Alkaloid CYP719 medium borderline
Mtru08G0017330.3 Alkaloid CYP719 medium borderline
Mtru08G0040370.1 Alkaloid CYP719 medium borderline
Mtru01G0034990.1 Alkaloid CYP80B1 low borderline
Mtru02G0046570.1 Alkaloid CYP80B1 medium borderline
Mtru03G0028010.1 Alkaloid CYP80B1 medium borderline
Mtru03G0029710.1 Alkaloid CYP80B1 medium borderline
Mtru03G0029760.1 Alkaloid CYP80B1 medium borderline
Mtru04G0037250.1 Alkaloid CYP80B1 low borderline
Mtru06G0003130.1 Alkaloid CYP80B1 medium borderline
Mtru07G0032220.1 Alkaloid CYP80B1 low borderline
Mtru08G0037720.1 Alkaloid CYP80B1 medium borderline
Mtru08G0037730.1 Alkaloid CYP80B1 medium borderline
Mtru08G0039320.1 Alkaloid CYP80B1 medium borderline
Mtru08G0039350.1 Alkaloid CYP80B1 medium borderline
Mtru08G0042310.1 Alkaloid CYP80B1 medium borderline
Mtru08G0042310.2 Alkaloid CYP80B1 medium borderline
Mtruscaffold02710014630.1 Alkaloid CYP80B1 low borderline
Mtruscaffold00020000360.1 Alkaloid CYP80F1 low borderline
Mtru01G0014850.1 Alkaloid G8O/G8H medium borderline
Mtru01G0018230.1 Alkaloid G8O/G8H medium borderline
Mtru01G0018240.1 Alkaloid G8O/G8H low borderline
Mtru01G0029820.1 Alkaloid G8O/G8H medium borderline
Mtru01G0061040.1 Alkaloid G8O/G8H low borderline
Mtru02G0003320.1 Alkaloid G8O/G8H medium borderline
Mtru02G0003340.1 Alkaloid G8O/G8H medium borderline
Mtru02G0003350.1 Alkaloid G8O/G8H medium borderline
Mtru02G0003360.1 Alkaloid G8O/G8H medium borderline
Mtru02G0003380.1 Alkaloid G8O/G8H medium borderline
Mtru02G0003410.1 Alkaloid G8O/G8H medium borderline
Mtru02G0017020.1 Alkaloid G8O/G8H medium borderline
Mtru02G0017020.2 Alkaloid G8O/G8H medium borderline
Mtru02G0020620.1 Alkaloid G8O/G8H medium borderline
Mtru02G0038800.1 Alkaloid G8O/G8H medium borderline
Mtru03G0023730.1 Alkaloid G8O/G8H medium borderline
Mtru03G0023870.1 Alkaloid G8O/G8H medium pass
Mtru03G0029730.1 Alkaloid G8O/G8H medium borderline
Mtru04G0000120.1 Alkaloid G8O/G8H medium borderline
Mtru04G0015640.1 Alkaloid G8O/G8H medium borderline
Mtru04G0043990.1 Alkaloid G8O/G8H medium borderline
Mtru04G0044000.1 Alkaloid G8O/G8H medium borderline
Mtru05G0010030.1 Alkaloid G8O/G8H medium pass
Mtru05G0015810.1 Alkaloid G8O/G8H medium borderline
Mtru05G0021020.1 Alkaloid G8O/G8H medium borderline
Mtru05G0030760.1 Alkaloid G8O/G8H medium borderline
Mtru05G0038340.1 Alkaloid G8O/G8H medium borderline
Mtru05G0038480.1 Alkaloid G8O/G8H medium borderline