PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

3238
Candidate Protein Records
2701
Pathway-Level Records
6792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Mtru04G0020120.1 Alkaloid GES medium pass
Mtru04G0020120.2 Alkaloid GES medium pass
Mtru04G0039580.1 Alkaloid GES medium pass
Mtru04G0046150.1 Alkaloid GES medium pass
Mtru04G0046160.1 Alkaloid GES medium pass
Mtru05G0017850.1 Alkaloid GES low borderline
Mtru05G0033180.1 Alkaloid GES medium pass
Mtru05G0039850.1 Alkaloid GES medium pass
Mtru05G0039910.1 Alkaloid GES medium pass
Mtru05G0045270.1 Alkaloid GES medium pass
Mtru05G0054680.1 Alkaloid GES medium pass
Mtru05G0054780.1 Alkaloid GES medium pass
Mtru06G0003090.1 Alkaloid GES medium pass
Mtru06G0003090.2 Alkaloid GES medium pass
Mtru06G0017700.1 Alkaloid GES medium pass
Mtru06G0026570.1 Alkaloid GES medium pass
Mtru06G0026580.1 Alkaloid GES medium pass
Mtru07G0003200.1 Alkaloid GES medium pass
Mtru07G0003870.1 Alkaloid GES low borderline
Mtru07G0003940.1 Alkaloid GES low borderline
Mtru07G0018780.1 Alkaloid GES low borderline
Mtru07G0022350.1 Alkaloid GES medium pass
Mtru07G0022360.1 Alkaloid GES medium pass
Mtru07G0046180.1 Alkaloid GES low borderline
Mtru08G0002100.1 Alkaloid GES medium pass
Mtru08G0023940.1 Alkaloid GES medium pass
Mtru01G0011170.1 Alkaloid GS high pass
Mtru01G0061250.1 Alkaloid GS high pass
Mtru01G0061250.2 Alkaloid GS high pass
Mtru02G0003020.1 Alkaloid GS high pass
Mtru02G0003030.1 Alkaloid GS medium pass
Mtru02G0004640.1 Alkaloid GS low borderline
Mtru02G0004640.2 Alkaloid GS low borderline
Mtru02G0004680.3 Alkaloid GS low borderline
Mtru02G0040970.1 Alkaloid GS low borderline
Mtru03G0050190.1 Alkaloid GS low borderline
Mtru04G0013320.1 Alkaloid GS low borderline
Mtru04G0014790.1 Alkaloid GS low borderline
Mtru04G0014920.1 Alkaloid GS low borderline
Mtru04G0015200.1 Alkaloid GS low borderline
Mtru04G0015260.1 Alkaloid GS low borderline
Mtru04G0020980.1 Alkaloid GS low borderline
Mtru04G0042510.3 Alkaloid GS low borderline
Mtru04G0060450.1 Alkaloid GS high pass
Mtru05G0018610.1 Alkaloid GS high pass
Mtru05G0018620.1 Alkaloid GS high pass
Mtru05G0018630.1 Alkaloid GS high pass
Mtru05G0018650.1 Alkaloid GS high pass
Mtru05G0018660.1 Alkaloid GS high pass
Mtru05G0018660.2 Alkaloid GS high pass