PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

3238
Candidate Protein Records
2701
Pathway-Level Records
6792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Mtru08G0000750.1 Alkaloid IO medium borderline
Mtru08G0007740.2 Alkaloid IO low borderline
Mtru08G0017660.1 Alkaloid IO medium borderline
Mtru08G0039710.3 Alkaloid IO low borderline
Mtru08G0039710.4 Alkaloid IO low borderline
Mtru08G0045970.2 Alkaloid IO low borderline
Mtru08G0053590.2 Alkaloid IO low borderline
Mtruscaffold17500024550.1 Alkaloid IO medium borderline
Mtru01G0006840.1 Alkaloid ISY medium pass
Mtru01G0006850.1 Alkaloid ISY medium pass
Mtru01G0006870.1 Alkaloid ISY medium pass
Mtru03G0004870.1 Alkaloid ISY medium pass
Mtru03G0026940.1 Alkaloid ISY medium pass
Mtru03G0056390.1 Alkaloid ISY medium pass
Mtru03G0056400.1 Alkaloid ISY medium pass
Mtru03G0056410.1 Alkaloid ISY medium pass
Mtru04G0034180.1 Alkaloid ISY medium pass
Mtru04G0064220.1 Alkaloid ISY medium pass
Mtru04G0064240.1 Alkaloid ISY medium pass
Mtru01G0009470.1 Alkaloid LAMT medium borderline
Mtru01G0061810.1 Alkaloid LAMT medium borderline
Mtru03G0021330.1 Alkaloid LAMT medium borderline
Mtru03G0022210.1 Alkaloid LAMT medium borderline
Mtru03G0029750.1 Alkaloid LAMT medium borderline
Mtru03G0029920.1 Alkaloid LAMT medium borderline
Mtru03G0066450.1 Alkaloid LAMT medium borderline
Mtru04G0007700.1 Alkaloid LAMT medium borderline
Mtru05G0011680.1 Alkaloid LAMT medium borderline
Mtru05G0027540.1 Alkaloid LAMT medium borderline
Mtru05G0054150.1 Alkaloid LAMT medium borderline
Mtru06G0023320.1 Alkaloid LAMT medium borderline
Mtru07G0038620.1 Alkaloid LAMT medium borderline
Mtru07G0038640.1 Alkaloid LAMT medium borderline
Mtru07G0038770.1 Alkaloid LAMT medium borderline
Mtru08G0010060.1 Alkaloid LAMT medium borderline
Mtru08G0010070.1 Alkaloid LAMT medium borderline
Mtru08G0010070.2 Alkaloid LAMT medium borderline
Mtru08G0039780.1 Alkaloid LAMT medium borderline
Mtru01G0058870.1 Alkaloid MPO medium pass
Mtru01G0058890.1 Alkaloid MPO high pass
Mtru03G0038810.1 Alkaloid MPO medium pass
Mtru03G0038810.2 Alkaloid MPO medium pass
Mtru03G0038810.3 Alkaloid MPO medium pass
Mtru03G0041230.1 Alkaloid MPO medium pass
Mtru04G0018940.1 Alkaloid MPO medium pass
Mtru04G0062100.1 Alkaloid MPO medium pass
Mtru04G0062120.1 Alkaloid MPO medium pass
Mtru04G0062130.1 Alkaloid MPO medium pass
Mtru05G0019880.1 Alkaloid MPO high pass
Mtru05G0019880.2 Alkaloid MPO high pass