PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

3238
Candidate Protein Records
2701
Pathway-Level Records
6792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Mtru08G0032030.1 Alkaloid NMT low borderline
Mtru08G0032040.1 Alkaloid NMT medium pass
Mtru08G0032070.1 Alkaloid NMT medium pass
Mtru08G0032080.1 Alkaloid NMT medium pass
Mtru08G0034310.1 Alkaloid NMT medium borderline
Mtru08G0034320.1 Alkaloid NMT medium borderline
Mtru08G0034330.1 Alkaloid NMT medium pass
Mtru08G0034340.1 Alkaloid NMT medium pass
Mtru08G0034350.1 Alkaloid NMT medium borderline
Mtru08G0034370.1 Alkaloid NMT medium borderline
Mtru08G0034370.2 Alkaloid NMT medium borderline
Mtru08G0034400.1 Alkaloid NMT medium borderline
Mtru08G0034410.1 Alkaloid NMT medium pass
Mtru08G0034430.1 Alkaloid NMT medium borderline
Mtru08G0035700.1 Alkaloid NMT medium pass
Mtru08G0035710.1 Alkaloid NMT medium pass
Mtru08G0036190.1 Alkaloid NMT medium pass
Mtru08G0038760.1 Alkaloid NMT medium pass
Mtru08G0038760.2 Alkaloid NMT medium pass
Mtru08G0039680.1 Alkaloid NMT medium borderline
Mtru08G0039680.2 Alkaloid NMT medium borderline
Mtru08G0039770.1 Alkaloid NMT medium borderline
Mtru08G0040240.1 Alkaloid NMT medium pass
Mtru08G0040820.1 Alkaloid NMT medium pass
Mtru08G0040840.1 Alkaloid NMT low borderline
Mtru08G0040870.1 Alkaloid NMT medium pass
Mtru08G0054560.1 Alkaloid NMT low borderline
Mtru08G0056980.1 Alkaloid NMT medium pass
Mtru08G0057640.1 Alkaloid NMT medium borderline
Mtru08G0057640.2 Alkaloid NMT medium borderline
Mtru08G0057640.3 Alkaloid NMT medium borderline
Mtru08G0057640.4 Alkaloid NMT medium borderline
Mtruscaffold00710008270.1 Alkaloid NMT medium pass
Mtruscaffold03760016610.1 Alkaloid NMT medium pass
Mtru03G0065030.1 Alkaloid ODC medium pass
Mtru03G0065050.1 Alkaloid ODC medium pass
Mtru01G0004830.1 Alkaloid PMT medium pass
Mtru01G0012820.1 Alkaloid PMT medium borderline
Mtru01G0019500.1 Alkaloid PMT medium pass
Mtru01G0019510.1 Alkaloid PMT low borderline
Mtru01G0019520.1 Alkaloid PMT medium pass
Mtru01G0019570.1 Alkaloid PMT medium pass
Mtru01G0019580.1 Alkaloid PMT low borderline
Mtru02G0034700.1 Alkaloid PMT low borderline
Mtru02G0058290.1 Alkaloid PMT low borderline
Mtru03G0013970.1 Alkaloid PMT low borderline
Mtru03G0035200.1 Alkaloid PMT low borderline
Mtru03G0039550.1 Alkaloid PMT medium borderline
Mtru03G0048360.1 Alkaloid PMT medium borderline
Mtru03G0048360.2 Alkaloid PMT medium borderline