PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

3238
Candidate Protein Records
2701
Pathway-Level Records
6792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Mtru05G0034320.1 Alkaloid 7DLGT medium pass
Mtru05G0034340.1 Alkaloid 7DLGT medium pass
Mtru05G0035560.1 Alkaloid 7DLGT medium pass
Mtru05G0035570.1 Alkaloid 7DLGT low borderline
Mtru05G0036140.1 Alkaloid 7DLGT low borderline
Mtru05G0037890.1 Alkaloid 7DLGT low borderline
Mtru05G0037930.1 Alkaloid 7DLGT medium pass
Mtru05G0039610.1 Alkaloid 7DLGT low borderline
Mtru05G0039620.1 Alkaloid 7DLGT low borderline
Mtru05G0039650.1 Alkaloid 7DLGT low borderline
Mtru05G0039660.1 Alkaloid 7DLGT low borderline
Mtru05G0039670.1 Alkaloid 7DLGT low borderline
Mtru05G0039680.1 Alkaloid 7DLGT low borderline
Mtru05G0041220.1 Alkaloid 7DLGT low borderline
Mtru05G0049350.1 Alkaloid 7DLGT low borderline
Mtru05G0051650.1 Alkaloid 7DLGT low borderline
Mtru05G0051670.1 Alkaloid 7DLGT low borderline
Mtru05G0051670.2 Alkaloid 7DLGT low borderline
Mtru05G0051680.1 Alkaloid 7DLGT low borderline
Mtru05G0051690.1 Alkaloid 7DLGT low borderline
Mtru05G0051700.1 Alkaloid 7DLGT low borderline
Mtru05G0051720.1 Alkaloid 7DLGT low borderline
Mtru05G0051730.1 Alkaloid 7DLGT low borderline
Mtru05G0051750.1 Alkaloid 7DLGT low borderline
Mtru05G0051760.1 Alkaloid 7DLGT low borderline
Mtru05G0057960.1 Alkaloid 7DLGT medium pass
Mtru05G0057990.1 Alkaloid 7DLGT low borderline
Mtru06G0001170.1 Alkaloid 7DLGT medium pass
Mtru06G0004190.1 Alkaloid 7DLGT high pass
Mtru06G0005500.1 Alkaloid 7DLGT high pass
Mtru06G0005510.1 Alkaloid 7DLGT medium pass
Mtru06G0005520.1 Alkaloid 7DLGT medium pass
Mtru06G0005560.1 Alkaloid 7DLGT high pass
Mtru06G0005700.1 Alkaloid 7DLGT low borderline
Mtru06G0005710.1 Alkaloid 7DLGT medium pass
Mtru06G0005730.1 Alkaloid 7DLGT high pass
Mtru06G0005750.1 Alkaloid 7DLGT high pass
Mtru06G0005780.1 Alkaloid 7DLGT high pass
Mtru06G0005790.1 Alkaloid 7DLGT low borderline
Mtru06G0005800.1 Alkaloid 7DLGT medium pass
Mtru06G0005810.1 Alkaloid 7DLGT medium pass
Mtru06G0005820.1 Alkaloid 7DLGT medium pass
Mtru06G0005840.1 Alkaloid 7DLGT medium pass
Mtru06G0005850.1 Alkaloid 7DLGT high pass
Mtru06G0005860.1 Alkaloid 7DLGT medium pass
Mtru06G0005870.1 Alkaloid 7DLGT high pass
Mtru06G0005880.1 Alkaloid 7DLGT high pass
Mtru06G0005890.1 Alkaloid 7DLGT medium pass
Mtru06G0005900.1 Alkaloid 7DLGT high pass
Mtru06G0005920.1 Alkaloid 7DLGT medium pass