PlantSME Plant secondary metabolism enzyme database

Medicago truncatula (medicago_truncatula)

Imported from atlas release summary for Medicago truncatula.

3238
Candidate Protein Records
2701
Pathway-Level Records
6792
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 776 20 UGT (307) View species results
Alkaloid pathway 660 20 7DLGT (137) View species results
Phenylpropanoid pathway 501 12 POD (218) View species results
Flavonoid pathway 400 11 UFGT (277) View species results
Rosmarinic acid pathway 186 7 C4H (81) View species results
Steroid pathway 178 12 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2512 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 465 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Mtruscaffold06080019450.1 Phenylpropanoid C3'H/CYP98A low borderline
Mtruscaffold06380019680.1 Phenylpropanoid C3'H/CYP98A medium borderline
Mtruscaffold07270020570.1 Phenylpropanoid C3'H/CYP98A low borderline
Mtruscaffold17500024550.1 Phenylpropanoid C3'H/CYP98A medium borderline
Mtru01G0014860.1 Phenylpropanoid C4H/CYP73A medium borderline
Mtru01G0051490.1 Phenylpropanoid C4H/CYP73A medium borderline
Mtru01G0061040.1 Phenylpropanoid C4H/CYP73A low borderline
Mtru02G0022230.1 Phenylpropanoid C4H/CYP73A medium pass
Mtru03G0029920.1 Phenylpropanoid C4H/CYP73A low borderline
Mtru04G0044000.1 Phenylpropanoid C4H/CYP73A low borderline
Mtru05G0010030.1 Phenylpropanoid C4H/CYP73A low borderline
Mtru05G0054200.1 Phenylpropanoid C4H/CYP73A low borderline
Mtru06G0034600.1 Phenylpropanoid C4H/CYP73A low borderline
Mtru06G0034660.1 Phenylpropanoid C4H/CYP73A low borderline
Mtru07G0048350.1 Phenylpropanoid C4H/CYP73A medium borderline
Mtru07G0048350.2 Phenylpropanoid C4H/CYP73A medium borderline
Mtru07G0048350.3 Phenylpropanoid C4H/CYP73A low borderline
Mtruscaffold00450006390.1 Phenylpropanoid C4H/CYP73A low borderline
Mtruscaffold00450006390.2 Phenylpropanoid C4H/CYP73A low borderline
Mtruscaffold00450006400.1 Phenylpropanoid C4H/CYP73A low borderline
Mtruscaffold00450006400.2 Phenylpropanoid C4H/CYP73A low borderline
Mtruscaffold01550011830.1 Phenylpropanoid C4H/CYP73A low borderline
Mtru01G0009440.1 Phenylpropanoid CAD medium borderline
Mtru01G0009450.1 Phenylpropanoid CAD medium borderline
Mtru01G0011170.1 Phenylpropanoid CAD medium pass
Mtru01G0055460.1 Phenylpropanoid CAD low borderline
Mtru01G0061250.1 Phenylpropanoid CAD medium pass
Mtru01G0061250.2 Phenylpropanoid CAD medium pass
Mtru02G0003020.1 Phenylpropanoid CAD medium pass
Mtru02G0003030.1 Phenylpropanoid CAD medium pass
Mtru02G0003910.1 Phenylpropanoid CAD low borderline
Mtru02G0034570.1 Phenylpropanoid CAD low borderline
Mtru02G0034670.1 Phenylpropanoid CAD low borderline
Mtru02G0034670.2 Phenylpropanoid CAD low borderline
Mtru02G0034670.3 Phenylpropanoid CAD medium pass
Mtru02G0034670.4 Phenylpropanoid CAD medium pass
Mtru02G0034740.1 Phenylpropanoid CAD low borderline
Mtru02G0042980.1 Phenylpropanoid CAD low borderline
Mtru02G0042990.1 Phenylpropanoid CAD low borderline
Mtru02G0043030.1 Phenylpropanoid CAD low borderline
Mtru02G0047390.1 Phenylpropanoid CAD low borderline
Mtru02G0047400.1 Phenylpropanoid CAD low borderline
Mtru02G0055430.1 Phenylpropanoid CAD medium borderline
Mtru03G0000120.1 Phenylpropanoid CAD medium borderline
Mtru03G0000120.2 Phenylpropanoid CAD medium borderline
Mtru03G0000120.3 Phenylpropanoid CAD medium borderline
Mtru03G0000130.1 Phenylpropanoid CAD medium borderline
Mtru03G0003560.1 Phenylpropanoid CAD medium borderline
Mtru03G0028340.1 Phenylpropanoid CAD medium borderline
Mtru03G0028340.2 Phenylpropanoid CAD medium borderline