PlantSME Plant secondary metabolism enzyme database

Oryza sativa (oryza_sativa)

Imported from atlas release summary for Oryza sativa.

2741
Candidate Protein Records
2290
Pathway-Level Records
5669
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 638 19 BAHD (236) View species results
Alkaloid pathway 531 24 7DLGT (95) View species results
Phenylpropanoid pathway 462 11 POD (239) View species results
Flavonoid pathway 317 11 UFGT (201) View species results
Steroid pathway 180 13 SMT1/SMT2/SMT3 (78) View species results
Rosmarinic acid pathway 162 7 C4H (77) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2120 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 417 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Osat11G0016530.1 Terpenoid CYP76 medium borderline
Osat11G0017570.1 Terpenoid CYP76 medium pass
Osat11G0019220.1 Terpenoid CYP76 low borderline
Osat12G0006800.1 Terpenoid CYP76 medium pass
Osat12G0007030.1 Terpenoid CYP76 medium borderline
Osat12G0010820.1 Terpenoid CYP76 medium borderline
Osat12G0023260.1 Terpenoid CYP76 medium pass
Osat12G0023270.1 Terpenoid CYP76 medium pass
Osat12G0023320.1 Terpenoid CYP76 medium pass
Osat01G0000580.1 Terpenoid DXR high pass
Osat01G0000580.2 Terpenoid DXR high pass
Osat05G0019630.1 Terpenoid DXS medium pass
Osat06G0003270.1 Terpenoid DXS medium pass
Osat06G0003270.2 Terpenoid DXS medium pass
Osat06G0003270.3 Terpenoid DXS medium pass
Osat06G0003270.4 Terpenoid DXS medium pass
Osat06G0003270.5 Terpenoid DXS medium pass
Osat07G0006750.1 Terpenoid DXS medium pass
Osat01G0033070.1 Terpenoid FPPS medium pass
Osat01G0033070.2 Terpenoid FPPS medium pass
Osat01G0033610.1 Terpenoid FPPS medium pass
Osat01G0044530.1 Terpenoid FPPS medium pass
Osat02G0042690.1 Terpenoid FPPS low borderline
Osat02G0042690.2 Terpenoid FPPS low borderline
Osat02G0042690.3 Terpenoid FPPS low borderline
Osat02G0042690.4 Terpenoid FPPS low borderline
Osat04G0034570.1 Terpenoid FPPS medium pass
Osat04G0034590.1 Terpenoid FPPS medium pass
Osat05G0009680.1 Terpenoid FPPS low borderline
Osat05G0029300.1 Terpenoid FPPS medium pass
Osat06G0005080.1 Terpenoid FPPS medium pass
Osat07G0026670.1 Terpenoid FPPS medium pass
Osat07G0026670.2 Terpenoid FPPS medium pass
Osat07G0026670.3 Terpenoid FPPS medium pass
Osat01G0011260.1 Terpenoid GGPPS medium borderline
Osat02G0031500.1 Terpenoid GGPPS medium borderline
Osat02G0031500.2 Terpenoid GGPPS medium borderline
Osat02G0031500.3 Terpenoid GGPPS medium borderline
Osat05G0032400.1 Terpenoid GGPPS medium borderline
Osat06G0030710.1 Terpenoid GGPPS medium borderline
Osat06G0030710.2 Terpenoid GGPPS medium borderline
Osat07G0024740.1 Terpenoid GGPPS medium borderline
Osat07G0024740.2 Terpenoid GGPPS medium borderline
Osat08G0006610.1 Terpenoid GGPPS medium borderline
Osat12G0011120.1 Terpenoid GGPPS medium borderline
Osat03G0036390.1 Terpenoid HDR/IspH high pass
Osat03G0036400.1 Terpenoid HDR/IspH high pass
Osat02G0027120.1 Terpenoid HDS/IspG high pass
Osat02G0034530.1 Terpenoid HMGR medium pass
Osat07G0028540.1 Terpenoid HMGR low borderline