PlantSME Plant secondary metabolism enzyme database

Oryza sativa (oryza_sativa)

Imported from atlas release summary for Oryza sativa.

2741
Candidate Protein Records
2290
Pathway-Level Records
5669
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 638 19 BAHD (236) View species results
Alkaloid pathway 531 24 7DLGT (95) View species results
Phenylpropanoid pathway 462 11 POD (239) View species results
Flavonoid pathway 317 11 UFGT (201) View species results
Steroid pathway 180 13 SMT1/SMT2/SMT3 (78) View species results
Rosmarinic acid pathway 162 7 C4H (77) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2120 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 417 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Osat08G0017310.1 Terpenoid HMGR low borderline
Osat08G0025820.1 Terpenoid HMGR medium pass
Osat09G0018640.1 Terpenoid HMGR medium pass
Osat03G0001530.1 Terpenoid HMGS high pass
Osat08G0028320.1 Terpenoid HMGS high pass
Osat09G0020650.1 Terpenoid HMGS high pass
Osat05G0019910.1 Terpenoid IDI medium pass
Osat07G0022120.1 Terpenoid IDI medium pass
Osat01G0046750.1 Terpenoid MCT/IspD high pass
Osat04G0031300.1 Terpenoid MCT/IspD low borderline
Osat04G0031300.2 Terpenoid MCT/IspD low borderline
Osat08G0007640.1 Terpenoid MCT/IspD low borderline
Osat08G0007640.2 Terpenoid MCT/IspD low borderline
Osat08G0007640.3 Terpenoid MCT/IspD low borderline
Osat11G0022870.1 Terpenoid MCT/IspD low borderline
Osat01G0052920.1 Terpenoid MDS/IspF low borderline
Osat02G0032240.1 Terpenoid MDS/IspF high pass
Osat02G0000620.1 Terpenoid MVD medium pass
Osat02G0000770.1 Terpenoid MVD medium pass
Osat02G0015970.1 Terpenoid MVD low borderline
Osat07G0027430.1 Terpenoid MVD low borderline
Osat07G0027430.2 Terpenoid MVD low borderline
Osat07G0027430.3 Terpenoid MVD low borderline
Osat02G0043510.1 Terpenoid MVK low borderline
Osat03G0001250.1 Terpenoid MVK low borderline
Osat03G0001250.2 Terpenoid MVK low borderline
Osat03G0044070.1 Terpenoid MVK low borderline
Osat06G0003840.1 Terpenoid MVK low borderline
Osat10G0007710.1 Terpenoid MVK medium pass
Osat03G0033210.1 Terpenoid PMK medium pass
Osat01G0016710.1 Terpenoid TPS medium pass
Osat01G0027560.1 Terpenoid TPS medium pass
Osat01G0053250.1 Terpenoid TPS low borderline
Osat01G0053250.2 Terpenoid TPS low borderline
Osat02G0001670.1 Terpenoid TPS medium pass
Osat02G0013290.1 Terpenoid TPS medium pass
Osat02G0017730.1 Terpenoid TPS medium pass
Osat02G0024620.1 Terpenoid TPS medium pass
Osat02G0024620.2 Terpenoid TPS medium pass
Osat02G0024620.3 Terpenoid TPS medium pass
Osat02G0024620.4 Terpenoid TPS medium pass
Osat02G0024660.1 Terpenoid TPS medium pass
Osat02G0024670.1 Terpenoid TPS medium pass
Osat02G0024670.2 Terpenoid TPS medium pass
Osat02G0024690.1 Terpenoid TPS medium pass
Osat02G0024710.1 Terpenoid TPS medium pass
Osat03G0018240.1 Terpenoid TPS medium pass
Osat03G0018250.1 Terpenoid TPS medium pass
Osat03G0019170.1 Terpenoid TPS medium pass
Osat03G0019180.1 Terpenoid TPS medium pass