PlantSME Plant secondary metabolism enzyme database

Oryza sativa (oryza_sativa)

Imported from atlas release summary for Oryza sativa.

2741
Candidate Protein Records
2290
Pathway-Level Records
5669
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 638 19 BAHD (236) View species results
Alkaloid pathway 531 24 7DLGT (95) View species results
Phenylpropanoid pathway 462 11 POD (239) View species results
Flavonoid pathway 317 11 UFGT (201) View species results
Steroid pathway 180 13 SMT1/SMT2/SMT3 (78) View species results
Rosmarinic acid pathway 162 7 C4H (77) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2120 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 417 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Osat10G0021690.3 Alkaloid H6H medium borderline
Osat10G0021690.4 Alkaloid H6H medium borderline
Osat10G0023210.1 Alkaloid H6H medium borderline
Osat10G0023270.1 Alkaloid H6H medium borderline
Osat11G0014970.1 Alkaloid H6H medium borderline
Osat01G0009710.1 Alkaloid IO medium borderline
Osat01G0033470.1 Alkaloid IO medium borderline
Osat01G0041870.1 Alkaloid IO medium borderline
Osat02G0009420.1 Alkaloid IO low borderline
Osat02G0031930.1 Alkaloid IO low borderline
Osat03G0025650.1 Alkaloid IO medium pass
Osat04G0003850.1 Alkaloid IO medium pass
Osat04G0003870.1 Alkaloid IO medium borderline
Osat04G0003970.1 Alkaloid IO medium borderline
Osat04G0008200.1 Alkaloid IO medium borderline
Osat04G0016670.1 Alkaloid IO medium borderline
Osat05G0000150.1 Alkaloid IO low borderline
Osat05G0014150.1 Alkaloid IO medium borderline
Osat06G0007690.1 Alkaloid IO medium pass
Osat07G0002830.1 Alkaloid IO low borderline
Osat07G0020130.1 Alkaloid IO low borderline
Osat07G0020130.2 Alkaloid IO low borderline
Osat07G0020130.3 Alkaloid IO low borderline
Osat07G0020130.4 Alkaloid IO low borderline
Osat07G0020170.2 Alkaloid IO low borderline
Osat08G0002310.1 Alkaloid IO medium borderline
Osat08G0010800.1 Alkaloid IO low borderline
Osat08G0028530.1 Alkaloid IO medium borderline
Osat10G0004380.1 Alkaloid IO medium borderline
Osat10G0009140.1 Alkaloid IO medium borderline
Osat10G0010950.1 Alkaloid IO medium borderline
Osat12G0023260.1 Alkaloid IO medium borderline
Osat12G0023270.1 Alkaloid IO medium borderline
Osat03G0023370.1 Alkaloid ISY medium pass
Osat03G0024190.1 Alkaloid ISY medium pass
Osat07G0026160.1 Alkaloid ISY medium pass
Osat02G0034940.1 Alkaloid LAMT medium borderline
Osat04G0035210.1 Alkaloid LAMT medium borderline
Osat04G0035310.1 Alkaloid LAMT medium borderline
Osat06G0010390.1 Alkaloid LAMT medium borderline
Osat06G0010460.1 Alkaloid LAMT medium borderline
Osat06G0010510.1 Alkaloid LAMT medium borderline
Osat06G0010520.1 Alkaloid LAMT medium borderline
Osat06G0010580.1 Alkaloid LAMT medium borderline
Osat06G0010590.1 Alkaloid LAMT medium borderline
Osat06G0010590.2 Alkaloid LAMT medium borderline
Osat06G0010590.3 Alkaloid LAMT medium borderline
Osat06G0010590.4 Alkaloid LAMT medium borderline
Osat06G0010590.5 Alkaloid LAMT medium borderline
Osat06G0014860.1 Alkaloid LAMT medium borderline