PlantSME Plant secondary metabolism enzyme database

Oryza sativa (oryza_sativa)

Imported from atlas release summary for Oryza sativa.

2741
Candidate Protein Records
2290
Pathway-Level Records
5669
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 638 19 BAHD (236) View species results
Alkaloid pathway 531 24 7DLGT (95) View species results
Phenylpropanoid pathway 462 11 POD (239) View species results
Flavonoid pathway 317 11 UFGT (201) View species results
Steroid pathway 180 13 SMT1/SMT2/SMT3 (78) View species results
Rosmarinic acid pathway 162 7 C4H (77) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2120 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 417 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Osat06G0014890.1 Alkaloid LAMT medium borderline
Osat06G0015890.1 Alkaloid LAMT medium borderline
Osat11G0010770.1 Alkaloid LAMT medium borderline
Osat11G0010800.1 Alkaloid LAMT medium borderline
Osat11G0010830.1 Alkaloid LAMT medium borderline
Osat11G0010840.1 Alkaloid LAMT medium borderline
Osat11G0010910.1 Alkaloid LAMT medium borderline
Osat11G0010940.1 Alkaloid LAMT medium borderline
Osat02G0026150.1 Alkaloid MPO medium pass
Osat02G0026160.1 Alkaloid MPO medium pass
Osat04G0002130.1 Alkaloid MPO medium pass
Osat04G0008680.1 Alkaloid MPO low borderline
Osat04G0008680.2 Alkaloid MPO low borderline
Osat04G0021390.1 Alkaloid MPO high pass
Osat06G0016370.1 Alkaloid MPO high pass
Osat06G0016380.1 Alkaloid MPO high pass
Osat01G0006840.1 Alkaloid NCS medium borderline
Osat01G0006840.2 Alkaloid NCS medium borderline
Osat01G0006840.3 Alkaloid NCS medium borderline
Osat01G0017730.1 Alkaloid NCS medium borderline
Osat01G0017730.2 Alkaloid NCS medium borderline
Osat01G0017740.1 Alkaloid NCS medium borderline
Osat03G0024360.2 Alkaloid NCS medium borderline
Osat04G0021350.1 Alkaloid NCS medium borderline
Osat04G0028900.1 Alkaloid NCS medium borderline
Osat04G0029830.1 Alkaloid NCS medium pass
Osat04G0029840.1 Alkaloid NCS medium pass
Osat04G0033630.1 Alkaloid NCS medium borderline
Osat04G0035400.1 Alkaloid NCS medium borderline
Osat04G0035400.2 Alkaloid NCS medium borderline
Osat04G0035420.1 Alkaloid NCS medium borderline
Osat06G0005710.1 Alkaloid NCS medium borderline
Osat06G0005770.1 Alkaloid NCS medium borderline
Osat06G0005800.1 Alkaloid NCS medium borderline
Osat07G0023400.1 Alkaloid NCS low borderline
Osat09G0007970.1 Alkaloid NCS low borderline
Osat09G0009210.1 Alkaloid NCS medium borderline
Osat09G0009240.1 Alkaloid NCS medium borderline
Osat09G0009280.1 Alkaloid NCS medium borderline
Osat09G0015720.1 Alkaloid NCS medium borderline
Osat10G0020740.1 Alkaloid NCS medium borderline
Osat10G0023200.1 Alkaloid NCS medium borderline
Osat10G0023230.1 Alkaloid NCS medium borderline
Osat10G0023230.2 Alkaloid NCS medium borderline
Osat10G0023230.3 Alkaloid NCS medium borderline
Osat10G0023230.4 Alkaloid NCS medium borderline
Osat10G0023230.5 Alkaloid NCS medium borderline
Osat10G0023230.6 Alkaloid NCS medium borderline
Osat10G0023230.7 Alkaloid NCS medium borderline
Osat10G0023230.8 Alkaloid NCS medium borderline