PlantSME Plant secondary metabolism enzyme database

Oryza sativa (oryza_sativa)

Imported from atlas release summary for Oryza sativa.

2290
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 638 19 BAHD (236) View species results
Alkaloid pathway 531 24 7DLGT (95) View species results
Phenylpropanoid pathway 462 11 POD (239) View species results
Flavonoid pathway 317 11 UFGT (201) View species results
Steroid pathway 180 13 SMT1/SMT2/SMT3 (78) View species results
Rosmarinic acid pathway 162 7 C4H (77) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2120 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 417 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Osat02G0026900.1 Rosmarinic Acid C4H low borderline
Osat02G0026910.1 Rosmarinic Acid C4H low borderline
Osat02G0033750.1 Rosmarinic Acid C4H low borderline
Osat02G0033750.2 Rosmarinic Acid C4H low borderline
Osat02G0033750.3 Rosmarinic Acid C4H low borderline
Osat03G0001060.1 Rosmarinic Acid C4H medium pass
Osat03G0002770.1 Rosmarinic Acid C4H medium pass
Osat03G0005350.1 Rosmarinic Acid C4H low borderline
Osat03G0009770.1 Rosmarinic Acid C4H low borderline
Osat03G0011240.1 Rosmarinic Acid C4H low borderline
Osat03G0011250.1 Rosmarinic Acid C4H medium pass
Osat03G0011370.1 Rosmarinic Acid C4H medium pass
Osat03G0017150.1 Rosmarinic Acid C4H low borderline
Osat03G0019610.1 Rosmarinic Acid C4H low borderline
Osat03G0023040.1 Rosmarinic Acid C4H medium pass
Osat03G0025520.1 Rosmarinic Acid C4H low borderline
Osat03G0025530.1 Rosmarinic Acid C4H low borderline
Osat03G0025650.1 Rosmarinic Acid C4H low borderline
Osat03G0027110.1 Rosmarinic Acid C4H low borderline
Osat03G0027190.1 Rosmarinic Acid C4H low borderline
Osat03G0027220.1 Rosmarinic Acid C4H medium pass
Osat03G0027270.1 Rosmarinic Acid C4H medium pass
Osat03G0027820.1 Rosmarinic Acid C4H low borderline
Osat03G0027830.1 Rosmarinic Acid C4H low borderline
Osat03G0030570.1 Rosmarinic Acid C4H medium pass
Osat03G0037090.1 Rosmarinic Acid C4H low borderline
Osat03G0038490.1 Rosmarinic Acid C4H low borderline
Osat03G0038500.1 Rosmarinic Acid C4H low borderline
Osat03G0038510.1 Rosmarinic Acid C4H low borderline
Osat03G0038520.1 Rosmarinic Acid C4H medium pass
Osat03G0044290.1 Rosmarinic Acid C4H low borderline
Osat03G0045370.1 Rosmarinic Acid C4H medium pass
Osat04G0000040.1 Rosmarinic Acid C4H medium pass
Osat04G0000040.2 Rosmarinic Acid C4H low borderline
Osat04G0001650.1 Rosmarinic Acid C4H low borderline
Osat04G0001670.1 Rosmarinic Acid C4H low borderline
Osat04G0003850.1 Rosmarinic Acid C4H low borderline
Osat04G0003860.1 Rosmarinic Acid C4H low borderline
Osat04G0003870.1 Rosmarinic Acid C4H medium pass
Osat04G0003970.1 Rosmarinic Acid C4H low borderline
Osat04G0004240.1 Rosmarinic Acid C4H low borderline
Osat04G0004360.1 Rosmarinic Acid C4H low borderline
Osat04G0008200.1 Rosmarinic Acid C4H low borderline
Osat04G0012350.1 Rosmarinic Acid C4H medium pass
Osat04G0016670.1 Rosmarinic Acid C4H low borderline
Osat04G0020950.1 Rosmarinic Acid C4H low borderline
Osat04G0021750.1 Rosmarinic Acid C4H low borderline
Osat04G0021760.1 Rosmarinic Acid C4H low borderline
Osat04G0026020.1 Rosmarinic Acid C4H low borderline
Osat04G0028390.1 Rosmarinic Acid C4H low borderline