PlantSME Plant secondary metabolism enzyme database

Oryza sativa (oryza_sativa)

Imported from atlas release summary for Oryza sativa.

2290
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 638 19 BAHD (236) View species results
Alkaloid pathway 531 24 7DLGT (95) View species results
Phenylpropanoid pathway 462 11 POD (239) View species results
Flavonoid pathway 317 11 UFGT (201) View species results
Steroid pathway 180 13 SMT1/SMT2/SMT3 (78) View species results
Rosmarinic acid pathway 162 7 C4H (77) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2120 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 417 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
Reset
Gene Pathway Family Confidence Status
Osat01G0033460.1 Rosmarinic Acid C4H low borderline
Osat01G0033470.1 Rosmarinic Acid C4H low borderline
Osat01G0041870.1 Rosmarinic Acid C4H medium pass
Osat01G0051800.1 Rosmarinic Acid C4H low borderline
Osat01G0051810.1 Rosmarinic Acid C4H low borderline
Osat01G0051820.1 Rosmarinic Acid C4H low borderline
Osat02G0000740.1 Rosmarinic Acid C4H low borderline
Osat02G0005760.1 Rosmarinic Acid C4H low borderline
Osat02G0005760.2 Rosmarinic Acid C4H low borderline
Osat02G0005760.3 Rosmarinic Acid C4H low borderline
Osat02G0005760.4 Rosmarinic Acid C4H low borderline
Osat02G0005760.5 Rosmarinic Acid C4H low borderline
Osat02G0006740.1 Rosmarinic Acid C4H low borderline
Osat02G0006750.1 Rosmarinic Acid C4H medium pass
Osat02G0006770.1 Rosmarinic Acid C4H medium pass
Osat02G0006790.1 Rosmarinic Acid C4H medium pass
Osat02G0006800.1 Rosmarinic Acid C4H low borderline
Osat02G0006810.1 Rosmarinic Acid C4H low borderline
Osat02G0006810.2 Rosmarinic Acid C4H low borderline
Osat02G0006820.1 Rosmarinic Acid C4H low borderline
Osat02G0006840.1 Rosmarinic Acid C4H low borderline
Osat02G0006860.1 Rosmarinic Acid C4H low borderline
Osat02G0006870.1 Rosmarinic Acid C4H medium pass
Osat02G0006880.1 Rosmarinic Acid C4H low borderline
Osat02G0006920.1 Rosmarinic Acid C4H low borderline
Osat02G0006930.1 Rosmarinic Acid C4H low borderline
Osat02G0006940.1 Rosmarinic Acid C4H medium pass
Osat02G0008400.1 Rosmarinic Acid C4H low borderline
Osat02G0009270.1 Rosmarinic Acid C4H medium pass
Osat02G0009280.1 Rosmarinic Acid C4H medium pass
Osat02G0009290.1 Rosmarinic Acid C4H low borderline
Osat02G0009620.1 Rosmarinic Acid C4H low borderline
Osat02G0009620.2 Rosmarinic Acid C4H low borderline
Osat02G0013270.1 Rosmarinic Acid C4H low borderline
Osat02G0016030.1 Rosmarinic Acid C4H low borderline
Osat02G0018250.1 Rosmarinic Acid C4H medium pass
Osat02G0018290.1 Rosmarinic Acid C4H medium pass
Osat02G0020240.1 Rosmarinic Acid C4H low borderline
Osat02G0020340.1 Rosmarinic Acid C4H low borderline
Osat02G0020410.1 Rosmarinic Acid C4H low borderline
Osat02G0020420.1 Rosmarinic Acid C4H low borderline
Osat02G0020430.1 Rosmarinic Acid C4H low borderline
Osat02G0020440.1 Rosmarinic Acid C4H low borderline
Osat02G0022140.1 Rosmarinic Acid C4H medium pass
Osat02G0024550.1 Rosmarinic Acid C4H medium pass
Osat02G0024570.1 Rosmarinic Acid C4H medium pass
Osat02G0024590.1 Rosmarinic Acid C4H medium pass
Osat02G0024630.1 Rosmarinic Acid C4H low borderline
Osat02G0024640.1 Rosmarinic Acid C4H low borderline
Osat02G0024700.1 Rosmarinic Acid C4H low borderline