PlantSME Plant secondary metabolism enzyme database

Oryza sativa (oryza_sativa)

Imported from atlas release summary for Oryza sativa.

2741
Candidate Protein Records
2290
Pathway-Level Records
5669
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 638 19 BAHD (236) View species results
Alkaloid pathway 531 24 7DLGT (95) View species results
Phenylpropanoid pathway 462 11 POD (239) View species results
Flavonoid pathway 317 11 UFGT (201) View species results
Steroid pathway 180 13 SMT1/SMT2/SMT3 (78) View species results
Rosmarinic acid pathway 162 7 C4H (77) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2120 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 417 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Osat12G0021820.1 Alkaloid 7DLGT low borderline
Osat01G0028540.1 Alkaloid 7DLH medium borderline
Osat01G0028590.1 Alkaloid 7DLH medium borderline
Osat01G0028600.1 Alkaloid 7DLH medium borderline
Osat04G0002200.1 Alkaloid 7DLH low borderline
Osat05G0017290.1 Alkaloid 7DLH medium borderline
Osat07G0014320.1 Alkaloid 7DLH medium borderline
Osat07G0029430.1 Alkaloid 7DLH low borderline
Osat10G0010970.2 Alkaloid 7DLH low borderline
Osat11G0001450.1 Alkaloid 7DLH medium borderline
Osat11G0002800.1 Alkaloid 7DLH medium borderline
Osat11G0017260.1 Alkaloid 7DLH low borderline
Osat12G0001440.1 Alkaloid 7DLH medium borderline
Osat12G0002610.1 Alkaloid 7DLH medium borderline
Osat02G0029470.1 Alkaloid 8HGO medium borderline
Osat02G0029470.2 Alkaloid 8HGO medium borderline
Osat02G0042120.1 Alkaloid 8HGO medium borderline
Osat02G0042120.2 Alkaloid 8HGO medium borderline
Osat02G0042120.3 Alkaloid 8HGO medium borderline
Osat03G0006930.1 Alkaloid 8HGO medium borderline
Osat03G0006940.1 Alkaloid 8HGO medium borderline
Osat03G0008890.1 Alkaloid 8HGO low borderline
Osat03G0008890.2 Alkaloid 8HGO low borderline
Osat03G0012520.1 Alkaloid 8HGO low borderline
Osat07G0021550.1 Alkaloid 8HGO low borderline
Osat07G0021550.2 Alkaloid 8HGO low borderline
Osat07G0021550.3 Alkaloid 8HGO low borderline
Osat07G0021620.1 Alkaloid 8HGO low borderline
Osat07G0021620.2 Alkaloid 8HGO low borderline
Osat07G0021620.3 Alkaloid 8HGO low borderline
Osat07G0027660.1 Alkaloid 8HGO medium borderline
Osat07G0027660.2 Alkaloid 8HGO medium borderline
Osat07G0027660.3 Alkaloid 8HGO medium borderline
Osat10G0003810.1 Alkaloid 8HGO medium borderline
Osat10G0019940.1 Alkaloid 8HGO low borderline
Osat11G0007950.1 Alkaloid 8HGO medium borderline
Osat11G0007950.2 Alkaloid 8HGO medium borderline
Osat11G0007950.3 Alkaloid 8HGO medium pass
Osat11G0007960.1 Alkaloid 8HGO medium borderline
Osat11G0007960.2 Alkaloid 8HGO medium borderline
Osat11G0007970.1 Alkaloid 8HGO medium borderline
Osat11G0007970.2 Alkaloid 8HGO medium borderline
Osat11G0007970.3 Alkaloid 8HGO medium borderline
Osat03G0029220.1 Alkaloid ADC low borderline
Osat03G0029220.2 Alkaloid ADC low borderline
Osat04G0000410.1 Alkaloid ADC medium pass
Osat04G0000410.2 Alkaloid ADC medium pass
Osat04G0000410.3 Alkaloid ADC medium pass
Osat06G0002330.1 Alkaloid ADC medium pass
Osat08G0020390.1 Alkaloid ADC medium pass