PlantSME Plant secondary metabolism enzyme database

Oryza sativa (oryza_sativa)

Imported from atlas release summary for Oryza sativa.

2741
Candidate Protein Records
2290
Pathway-Level Records
5669
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 638 19 BAHD (236) View species results
Alkaloid pathway 531 24 7DLGT (95) View species results
Phenylpropanoid pathway 462 11 POD (239) View species results
Flavonoid pathway 317 11 UFGT (201) View species results
Steroid pathway 180 13 SMT1/SMT2/SMT3 (78) View species results
Rosmarinic acid pathway 162 7 C4H (77) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2120 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 417 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Osat11G0003170.1 Rosmarinic Acid C4H low borderline
Osat11G0016410.1 Rosmarinic Acid C4H low borderline
Osat11G0016410.2 Rosmarinic Acid C4H low borderline
Osat11G0016530.1 Rosmarinic Acid C4H low borderline
Osat11G0016540.1 Rosmarinic Acid C4H low borderline
Osat11G0017570.1 Rosmarinic Acid C4H low borderline
Osat11G0025820.1 Rosmarinic Acid C4H low borderline
Osat11G0025830.1 Rosmarinic Acid C4H low borderline
Osat12G0001430.1 Rosmarinic Acid C4H low borderline
Osat12G0001440.1 Rosmarinic Acid C4H low borderline
Osat12G0002940.1 Rosmarinic Acid C4H low borderline
Osat12G0006800.1 Rosmarinic Acid C4H medium pass
Osat12G0007030.1 Rosmarinic Acid C4H low borderline
Osat12G0010820.1 Rosmarinic Acid C4H medium pass
Osat12G0012000.1 Rosmarinic Acid C4H low borderline
Osat12G0018560.1 Rosmarinic Acid C4H low borderline
Osat12G0023260.1 Rosmarinic Acid C4H medium pass
Osat12G0023270.1 Rosmarinic Acid C4H low borderline
Osat12G0023320.1 Rosmarinic Acid C4H low borderline
Osat12G0027260.1 Rosmarinic Acid C4H low borderline
Osat01G0035760.1 Rosmarinic Acid CPR low borderline
Osat02G0000330.1 Rosmarinic Acid CPR low borderline
Osat02G0000330.2 Rosmarinic Acid CPR low borderline
Osat04G0034350.1 Rosmarinic Acid CPR medium pass
Osat05G0015710.1 Rosmarinic Acid CPR medium pass
Osat08G0009460.1 Rosmarinic Acid CPR medium pass
Osat08G0028090.1 Rosmarinic Acid CPR low borderline
Osat09G0023530.1 Rosmarinic Acid CPR medium pass
Osat12G0026480.1 Rosmarinic Acid CPR low borderline
Osat01G0009800.1 Rosmarinic Acid HPPR medium pass
Osat01G0009800.2 Rosmarinic Acid HPPR medium pass
Osat04G0000350.1 Rosmarinic Acid HPPR medium pass
Osat04G0000350.2 Rosmarinic Acid HPPR medium pass
Osat04G0000380.1 Rosmarinic Acid HPPR medium pass
Osat04G0000390.1 Rosmarinic Acid HPPR medium pass
Osat04G0000400.1 Rosmarinic Acid HPPR medium pass
Osat04G0033520.1 Rosmarinic Acid HPPR low borderline
Osat02G0028760.1 Rosmarinic Acid PAL high pass
Osat02G0028770.1 Rosmarinic Acid PAL high pass
Osat02G0028770.2 Rosmarinic Acid PAL high pass
Osat02G0028770.3 Rosmarinic Acid PAL high pass
Osat02G0028780.1 Rosmarinic Acid PAL high pass
Osat02G0028790.1 Rosmarinic Acid PAL high pass
Osat04G0024530.1 Rosmarinic Acid PAL high pass
Osat04G0024530.2 Rosmarinic Acid PAL medium pass
Osat04G0024560.1 Rosmarinic Acid PAL high pass
Osat05G0020850.1 Rosmarinic Acid PAL high pass
Osat08G0013210.1 Rosmarinic Acid PAL low borderline
Osat11G0030150.1 Rosmarinic Acid PAL high pass
Osat12G0019030.1 Rosmarinic Acid PAL high pass