PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

2205
Candidate Protein Records
1765
Pathway-Level Records
4100
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLGT
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Protein/Isoform Record Pathway Family Confidence Status
SIchi01G0000400.1 Alkaloid 7DLGT high pass
SIchi01G0000410.1 Alkaloid 7DLGT high pass
SIchi01G0000530.1 Alkaloid 7DLGT high pass
SIchi01G0000550.1 Alkaloid 7DLGT high pass
SIchi01G0000590.1 Alkaloid 7DLGT high pass
SIchi01G0000610.1 Alkaloid 7DLGT medium pass
SIchi01G0000620.1 Alkaloid 7DLGT medium pass
SIchi01G0000630.1 Alkaloid 7DLGT high pass
SIchi01G0001960.1 Alkaloid 7DLGT medium pass
SIchi01G0002880.1 Alkaloid 7DLGT medium pass
SIchi01G0002890.1 Alkaloid 7DLGT medium pass
SIchi02G0001350.1 Alkaloid 7DLGT high pass
SIchi02G0001360.1 Alkaloid 7DLGT low borderline
SIchi02G0001690.1 Alkaloid 7DLGT low borderline
SIchi02G0001690.2 Alkaloid 7DLGT low borderline
SIchi03G0000820.1 Alkaloid 7DLGT low borderline
SIchi03G0000840.1 Alkaloid 7DLGT low borderline
SIchi03G0000850.1 Alkaloid 7DLGT medium pass
SIchi03G0001150.1 Alkaloid 7DLGT medium pass
SIchi03G0001190.1 Alkaloid 7DLGT low borderline
SIchi04G0002060.1 Alkaloid 7DLGT low borderline
SIchi04G0005410.1 Alkaloid 7DLGT medium pass
SIchi05G0002080.1 Alkaloid 7DLGT low borderline
SIchi05G0002090.1 Alkaloid 7DLGT low borderline
SIchi05G0007350.1 Alkaloid 7DLGT low borderline
SIchi05G0007370.1 Alkaloid 7DLGT low borderline
SIchi05G0007380.1 Alkaloid 7DLGT low borderline
SIchi06G0001610.1 Alkaloid 7DLGT low borderline
SIchi07G0000210.1 Alkaloid 7DLGT medium pass
SIchi07G0000220.1 Alkaloid 7DLGT medium pass
SIchi07G0004690.1 Alkaloid 7DLGT medium pass
SIchi07G0004770.1 Alkaloid 7DLGT low borderline
SIchi08G0001360.1 Alkaloid 7DLGT medium pass
SIchi08G0001570.1 Alkaloid 7DLGT medium pass
SIchi08G0001580.1 Alkaloid 7DLGT low borderline
SIchi08G0001590.1 Alkaloid 7DLGT low borderline
SIchi09G0001910.1 Alkaloid 7DLGT medium pass
SIchi09G0001910.2 Alkaloid 7DLGT medium pass
SIchi09G0001910.3 Alkaloid 7DLGT medium pass
SIchi09G0001930.1 Alkaloid 7DLGT high pass
SIchi09G0007000.1 Alkaloid 7DLGT medium pass
SIchi10G0007410.1 Alkaloid 7DLGT medium pass
SIchi11G0002820.1 Alkaloid 7DLGT medium pass
SIchi11G0002840.1 Alkaloid 7DLGT low borderline
SIchi11G0004790.1 Alkaloid 7DLGT low borderline
SIchi11G0004820.1 Alkaloid 7DLGT low borderline
SIchi11G0004830.1 Alkaloid 7DLGT low borderline
SIchi11G0007560.1 Alkaloid 7DLGT medium pass
SIchi11G0007570.1 Alkaloid 7DLGT low borderline
SIchi11G0008600.1 Alkaloid 7DLGT low borderline