PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

1765
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
SIchi03G0003400.1 Rosmarinic Acid C4H medium pass
SIchi03G0005510.1 Rosmarinic Acid C4H low borderline
SIchi03G0007230.1 Rosmarinic Acid C4H low borderline
SIchi03G0007230.2 Rosmarinic Acid C4H low borderline
SIchi03G0007230.3 Rosmarinic Acid C4H low borderline
SIchi03G0010830.1 Rosmarinic Acid C4H low borderline
SIchi03G0010830.2 Rosmarinic Acid C4H low borderline
SIchi03G0010830.3 Rosmarinic Acid C4H low borderline
SIchi03G0010830.4 Rosmarinic Acid C4H low borderline
SIchi03G0010840.1 Rosmarinic Acid C4H low borderline
SIchi03G0010840.2 Rosmarinic Acid C4H low borderline
SIchi03G0010850.3 Rosmarinic Acid C4H low borderline
SIchi03G0011110.1 Rosmarinic Acid C4H low borderline
SIchi04G0001220.1 Rosmarinic Acid C4H low borderline
SIchi04G0001240.1 Rosmarinic Acid C4H medium pass
SIchi04G0001250.1 Rosmarinic Acid C4H medium pass
SIchi04G0001270.1 Rosmarinic Acid C4H medium pass
SIchi04G0001280.1 Rosmarinic Acid C4H low borderline
SIchi04G0001290.1 Rosmarinic Acid C4H low borderline
SIchi04G0001300.1 Rosmarinic Acid C4H low borderline
SIchi04G0001320.1 Rosmarinic Acid C4H medium pass
SIchi04G0001340.1 Rosmarinic Acid C4H medium pass
SIchi04G0001410.1 Rosmarinic Acid C4H low borderline
SIchi04G0001430.1 Rosmarinic Acid C4H medium pass
SIchi04G0001430.2 Rosmarinic Acid C4H medium pass
SIchi04G0001440.1 Rosmarinic Acid C4H low borderline
SIchi04G0001450.1 Rosmarinic Acid C4H low borderline
SIchi04G0001460.1 Rosmarinic Acid C4H low borderline
SIchi04G0001470.1 Rosmarinic Acid C4H medium pass
SIchi04G0001480.1 Rosmarinic Acid C4H medium pass
SIchi04G0004270.1 Rosmarinic Acid C4H medium pass
SIchi04G0007970.1 Rosmarinic Acid C4H low borderline
SIchi05G0009050.1 Rosmarinic Acid C4H low borderline
SIchi06G0000990.3 Rosmarinic Acid C4H low borderline
SIchi06G0006840.1 Rosmarinic Acid C4H low borderline
SIchi06G0008060.1 Rosmarinic Acid C4H medium pass
SIchi06G0008110.1 Rosmarinic Acid C4H medium pass
SIchi06G0008230.1 Rosmarinic Acid C4H medium pass
SIchi06G0010100.1 Rosmarinic Acid C4H low borderline
SIchi06G0010100.2 Rosmarinic Acid C4H low borderline
SIchi06G0010110.1 Rosmarinic Acid C4H low borderline
SIchi07G0000890.1 Rosmarinic Acid C4H low borderline
SIchi07G0000930.1 Rosmarinic Acid C4H medium pass
SIchi07G0008000.1 Rosmarinic Acid C4H low borderline
SIchi07G0008010.1 Rosmarinic Acid C4H low borderline
SIchi08G0002430.1 Rosmarinic Acid C4H low borderline
SIchi08G0006840.1 Rosmarinic Acid C4H low borderline
SIchi09G0001060.1 Rosmarinic Acid C4H low borderline
SIchi09G0001650.1 Rosmarinic Acid C4H low borderline
SIchi09G0001650.2 Rosmarinic Acid C4H low borderline