PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

1765
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAD
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Gene Pathway Family Confidence Status Best Target
SIchi02G0002460.1 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
SIchi02G0002510.1 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
SIchi02G0005910.2 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
SIchi02G0008760.1 Phenylpropanoid CAD medium pass CAD__00009__sp_P42734_CADH9_ARATH
SIchi03G0000520.1 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
SIchi03G0009220.1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
SIchi03G0009220.2 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
SIchi03G0009220.3 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
SIchi03G0009230.1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
SIchi03G0009280.1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
SIchi03G0009280.2 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
SIchi03G0009280.3 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
SIchi03G0009280.4 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
SIchi03G0009310.1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
SIchi03G0009330.1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
SIchi03G0009330.2 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
SIchi03G0009330.3 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
SIchi03G0009330.4 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
SIchi05G0008400.1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
SIchi05G0008400.2 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
SIchi06G0006460.1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
SIchi06G0006460.2 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
SIchi06G0006460.3 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
SIchi06G0006460.4 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
SIchi08G0001380.1 Phenylpropanoid CAD medium pass CAD__00014__sp_Q2KNL5_CADH1_OCIBA
SIchi08G0001380.2 Phenylpropanoid CAD medium pass CAD__00014__sp_Q2KNL5_CADH1_OCIBA
SIchi08G0001380.3 Phenylpropanoid CAD medium pass CAD__00014__sp_Q2KNL5_CADH1_OCIBA
SIchi08G0001760.1 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
SIchi08G0001760.2 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
SIchi08G0001760.3 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
SIchi08G0001760.4 Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
SIchi09G0004320.1 Phenylpropanoid CAD low borderline CAD__00012__sp_Q02972_CADH8_ARATH
SIchi09G0004320.2 Phenylpropanoid CAD low borderline CAD__00012__sp_Q02972_CADH8_ARATH
SIchi09G0004320.3 Phenylpropanoid CAD low borderline CAD__00012__sp_Q02972_CADH8_ARATH
SIchi11G0001160.1 Phenylpropanoid CAD low borderline CAD__00008__sp_O49482_CADH5_ARATH
SIchi11G0001160.2 Phenylpropanoid CAD low borderline CAD__00008__sp_O49482_CADH5_ARATH
SIchi11G0001160.3 Phenylpropanoid CAD low borderline CAD__00008__sp_O49482_CADH5_ARATH
SIchi11G0007060.1 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
SIchi11G0007330.1 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
SIchi11G0007340.1 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
SIchi11G0007350.1 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
SIchi11G0007350.2 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
SIchi11G0007350.3 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
SIchi11G0007350.4 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
SIchi11G0007360.1 Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
SIchi12G0002540.1 Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
SIchi16G0000660.1 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
SIchi16G0000690.1 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
SIchi16G0001030.1 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
SIchi16G0001050.1 Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE