PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

1765
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status Best Target
SIchi23G0000810.1 Flavonoid F3H medium borderline F3H__00009__sp_Q9ZWQ9_FLS_CITUN
SIchi23G0006990.1 Flavonoid F3H medium pass F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
SIchi24G0000130.1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
SIchi24G0000130.2 Flavonoid F3H medium pass F3H__00001__sp_A0A4D6Q4T7_FL3H2_CROXC
SIchi24G0001890.1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
SIchi24G0001900.1 Flavonoid F3H medium borderline F3H__00005__sp_Q7XZQ6_FLS_PETCR
SIchi24G0003090.1 Flavonoid F3H medium pass F3H__00001__sp_A0A4D6Q4T7_FL3H2_CROXC
SIchi24G0003090.2 Flavonoid F3H medium pass F3H__00001__sp_A0A4D6Q4T7_FL3H2_CROXC
SIchi24G0003110.1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
SIchi24G0003120.1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
SIchi25G0003830.1 Flavonoid F3H medium borderline F3H__00006__sp_Q7XZQ7_FL3H_PETCR
SIchi25G0003840.1 Flavonoid F3H medium borderline F3H__00002__sp_A0A4D6Q9B0_FL3H1_CROXC
SIchi25G0003880.1 Flavonoid F3H medium borderline F3H__00006__sp_Q7XZQ7_FL3H_PETCR
SIchi25G0003890.1 Flavonoid F3H medium borderline F3H__00009__sp_Q9ZWQ9_FLS_CITUN
SIchi25G0003890.2 Flavonoid F3H medium borderline F3H__00008__sp_Q96330_FLS1_ARATH
SIchi25G0003900.1 Flavonoid F3H medium borderline F3H__00008__sp_Q96330_FLS1_ARATH
SIchi25G0003920.1 Flavonoid F3H medium borderline F3H__00005__sp_Q7XZQ6_FLS_PETCR
SIchi25G0003950.1 Flavonoid F3H medium borderline F3H__00005__sp_Q7XZQ6_FLS_PETCR
SIchi25G0003960.1 Flavonoid F3H medium borderline F3H__00006__sp_Q7XZQ7_FL3H_PETCR
SIchi25G0003980.1 Flavonoid F3H medium borderline F3H__00005__sp_Q7XZQ6_FLS_PETCR
SIchi25G0003990.1 Flavonoid F3H medium borderline F3H__00005__sp_Q7XZQ6_FLS_PETCR
SIchi26G0000340.1 Flavonoid F3H medium borderline F3H__00005__sp_Q7XZQ6_FLS_PETCR
SIchi26G0000350.1 Flavonoid F3H medium borderline F3H__00009__sp_Q9ZWQ9_FLS_CITUN
SIchi26G0004400.1 Flavonoid F3H medium borderline F3H__00006__sp_Q7XZQ7_FL3H_PETCR