PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

1765
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
SIchi01G0006290.1 Alkaloid T3O medium pass
SIchi01G0006290.3 Alkaloid T3O medium pass
SIchi01G0006290.5 Alkaloid T3O medium pass
SIchi01G0006310.1 Alkaloid T3O medium pass
SIchi01G0007670.3 Alkaloid T3O low borderline
SIchi01G0007670.4 Alkaloid T3O low borderline
SIchi01G0008730.1 Alkaloid T3O low borderline
SIchi01G0008730.2 Alkaloid T3O low borderline
SIchi01G0008990.1 Alkaloid T3O medium borderline
SIchi01G0009000.1 Alkaloid T3O medium borderline
SIchi02G0002010.1 Alkaloid T3O medium borderline
SIchi02G0002420.1 Alkaloid T3O medium pass
SIchi02G0007100.1 Alkaloid T3O medium pass
SIchi02G0007100.2 Alkaloid T3O medium pass
SIchi02G0007600.1 Alkaloid T3O medium borderline
SIchi03G0001780.1 Alkaloid T3O medium borderline
SIchi03G0001900.1 Alkaloid T3O medium borderline
SIchi03G0001900.2 Alkaloid T3O medium borderline
SIchi03G0001900.3 Alkaloid T3O medium borderline
SIchi03G0003390.1 Alkaloid T3O medium borderline
SIchi03G0003400.1 Alkaloid T3O medium borderline
SIchi03G0004330.1 Alkaloid T3O low borderline
SIchi03G0004350.1 Alkaloid T3O low borderline
SIchi03G0007230.1 Alkaloid T3O medium pass
SIchi03G0007230.2 Alkaloid T3O low borderline
SIchi03G0007230.3 Alkaloid T3O medium pass
SIchi03G0011110.1 Alkaloid T3O medium borderline
SIchi04G0001220.1 Alkaloid T3O medium borderline
SIchi04G0001240.1 Alkaloid T3O medium borderline
SIchi04G0001320.1 Alkaloid T3O medium borderline
SIchi04G0001340.1 Alkaloid T3O medium borderline
SIchi04G0001430.1 Alkaloid T3O medium borderline
SIchi04G0001430.2 Alkaloid T3O medium borderline
SIchi04G0001470.1 Alkaloid T3O medium borderline
SIchi04G0001480.1 Alkaloid T3O medium borderline
SIchi04G0004270.1 Alkaloid T3O medium borderline
SIchi04G0007970.1 Alkaloid T3O low borderline
SIchi05G0009050.1 Alkaloid T3O high pass
SIchi06G0000990.1 Alkaloid T3O low borderline
SIchi06G0000990.2 Alkaloid T3O low borderline
SIchi06G0006840.1 Alkaloid T3O medium pass
SIchi06G0010100.1 Alkaloid T3O medium borderline
SIchi07G0000890.1 Alkaloid T3O medium pass
SIchi07G0000930.1 Alkaloid T3O medium borderline
SIchi07G0001550.1 Alkaloid T3O low borderline
SIchi07G0008000.1 Alkaloid T3O medium pass
SIchi07G0008000.2 Alkaloid T3O medium pass
SIchi07G0008010.1 Alkaloid T3O medium pass
SIchi07G0008010.2 Alkaloid T3O medium pass
SIchi07G0009930.1 Alkaloid T3O low borderline