PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

1765
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
SIchi07G0009930.2 Alkaloid T3O low borderline
SIchi08G0002430.1 Alkaloid T3O medium pass
SIchi09G0001650.1 Alkaloid T3O medium pass
SIchi09G0001650.2 Alkaloid T3O medium pass
SIchi09G0001650.3 Alkaloid T3O medium pass
SIchi10G0002310.1 Alkaloid T3O medium pass
SIchi10G0006730.1 Alkaloid T3O medium borderline
SIchi10G0007770.1 Alkaloid T3O medium pass
SIchi10G0007770.2 Alkaloid T3O medium pass
SIchi10G0007770.3 Alkaloid T3O medium pass
SIchi10G0007920.1 Alkaloid T3O medium borderline
SIchi10G0010440.1 Alkaloid T3O low borderline
SIchi11G0002750.1 Alkaloid T3O medium borderline
SIchi11G0004280.1 Alkaloid T3O medium borderline
SIchi11G0006210.5 Alkaloid T3O low borderline
SIchi11G0008770.1 Alkaloid T3O medium pass
SIchi11G0008770.2 Alkaloid T3O medium pass
SIchi11G0008770.3 Alkaloid T3O medium pass
SIchi11G0008770.4 Alkaloid T3O medium pass
SIchi12G0001310.1 Alkaloid T3O low borderline
SIchi12G0001310.2 Alkaloid T3O low borderline
SIchi12G0006610.1 Alkaloid T3O medium borderline
SIchi13G0000900.1 Alkaloid T3O medium borderline
SIchi13G0001880.1 Alkaloid T3O medium borderline
SIchi14G0000860.1 Alkaloid T3O medium borderline
SIchi14G0000890.1 Alkaloid T3O medium borderline
SIchi14G0000890.2 Alkaloid T3O medium borderline
SIchi14G0000890.3 Alkaloid T3O medium borderline
SIchi14G0000890.4 Alkaloid T3O medium borderline
SIchi14G0000890.5 Alkaloid T3O medium borderline
SIchi14G0005560.1 Alkaloid T3O medium pass
SIchi15G0003010.1 Alkaloid T3O medium borderline
SIchi15G0003500.1 Alkaloid T3O medium borderline
SIchi15G0006130.1 Alkaloid T3O medium pass
SIchi15G0006200.1 Alkaloid T3O medium pass
SIchi15G0006630.1 Alkaloid T3O medium borderline
SIchi15G0006640.1 Alkaloid T3O medium borderline
SIchi15G0007120.1 Alkaloid T3O medium borderline
SIchi16G0004710.1 Alkaloid T3O low borderline
SIchi17G0004960.1 Alkaloid T3O low borderline
SIchi19G0007970.1 Alkaloid T3O low borderline
SIchi20G0001210.1 Alkaloid T3O medium pass
SIchi20G0001260.1 Alkaloid T3O medium borderline
SIchi20G0001270.1 Alkaloid T3O medium borderline
SIchi20G0003090.1 Alkaloid T3O medium pass
SIchi20G0003090.2 Alkaloid T3O medium pass
SIchi20G0003090.3 Alkaloid T3O medium pass
SIchi20G0004850.1 Alkaloid T3O medium borderline
SIchi20G0004850.2 Alkaloid T3O medium borderline
SIchi21G0007190.1 Alkaloid T3O low borderline