PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

2205
Candidate Protein Records
1765
Pathway-Level Records
4100
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
SIchi25G0002910.3 Terpenoid GGPPS medium borderline
SIchi25G0002910.4 Terpenoid GGPPS medium borderline
SIchi08G0000280.1 Terpenoid HDR/IspH high pass
SIchi08G0000280.2 Terpenoid HDR/IspH high pass
SIchi08G0000280.3 Terpenoid HDR/IspH high pass
SIchi06G0010150.1 Terpenoid HDS/IspG high pass
SIchi06G0010150.2 Terpenoid HDS/IspG medium pass
SIchi06G0010150.3 Terpenoid HDS/IspG high pass
SIchi06G0010150.4 Terpenoid HDS/IspG high pass
SIchi02G0009310.1 Terpenoid HMGR medium pass
SIchi18G0005730.1 Terpenoid HMGR medium pass
SIchi18G0005730.2 Terpenoid HMGR medium pass
SIchi01G0008820.1 Terpenoid HMGS high pass
SIchi01G0008820.2 Terpenoid HMGS high pass
SIchi09G0001450.1 Terpenoid IDI medium pass
SIchi09G0001450.2 Terpenoid IDI medium pass
SIchi10G0001990.1 Terpenoid IDI low borderline
SIchi10G0001990.2 Terpenoid IDI low borderline
SIchi10G0001990.3 Terpenoid IDI low borderline
SIchi10G0001990.4 Terpenoid IDI low borderline
SIchi09G0007750.1 Terpenoid MCT/IspD high pass
SIchi09G0007750.2 Terpenoid MCT/IspD high pass
SIchi24G0002980.1 Terpenoid MCT/IspD low borderline
SIchi24G0002980.2 Terpenoid MCT/IspD low borderline
SIchi01G0009830.1 Terpenoid MDS/IspF high pass
SIchi06G0002320.1 Terpenoid MVD medium pass
SIchi06G0002320.2 Terpenoid MVD medium pass
SIchi09G0005390.1 Terpenoid MVD medium pass
SIchi10G0008560.1 Terpenoid MVD low borderline
SIchi08G0002160.1 Terpenoid MVK low borderline
SIchi09G0003220.1 Terpenoid MVK medium pass
SIchi09G0003220.2 Terpenoid MVK medium pass
SIchi09G0003220.3 Terpenoid MVK medium pass
SIchi13G0007180.1 Terpenoid MVK low borderline
SIchi13G0007180.2 Terpenoid MVK low borderline
SIchi07G0008560.1 Terpenoid PMK medium pass
SIchi02G0003500.1 Terpenoid TPS medium pass
SIchi02G0003520.1 Terpenoid TPS medium pass
SIchi03G0009220.1 Terpenoid TPS medium pass
SIchi03G0009220.2 Terpenoid TPS medium pass
SIchi03G0009220.3 Terpenoid TPS medium pass
SIchi03G0009230.1 Terpenoid TPS medium pass
SIchi03G0009240.1 Terpenoid TPS medium pass
SIchi03G0009250.1 Terpenoid TPS medium pass
SIchi03G0009260.1 Terpenoid TPS medium pass
SIchi03G0009270.1 Terpenoid TPS medium pass
SIchi03G0009280.1 Terpenoid TPS medium pass
SIchi03G0009280.2 Terpenoid TPS medium pass
SIchi03G0009280.3 Terpenoid TPS medium pass
SIchi03G0009280.4 Terpenoid TPS medium pass