PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

2205
Candidate Protein Records
1765
Pathway-Level Records
4100
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
SIchi03G0006250.1 Alkaloid PMT medium pass
SIchi03G0006250.2 Alkaloid PMT medium pass
SIchi04G0000450.1 Alkaloid PMT low borderline
SIchi04G0001900.1 Alkaloid PMT medium borderline
SIchi04G0001900.2 Alkaloid PMT medium borderline
SIchi04G0009090.1 Alkaloid PMT medium borderline
SIchi07G0009110.1 Alkaloid PMT low borderline
SIchi11G0005180.1 Alkaloid PMT low borderline
SIchi12G0008180.1 Alkaloid PMT medium pass
SIchi12G0008180.2 Alkaloid PMT medium pass
SIchi15G0003910.1 Alkaloid PMT medium pass
SIchi15G0003920.1 Alkaloid PMT medium pass
SIchi15G0003940.1 Alkaloid PMT medium pass
SIchi18G0005510.1 Alkaloid PMT medium pass
SIchi19G0000900.1 Alkaloid PMT medium borderline
SIchi19G0000900.2 Alkaloid PMT medium borderline
SIchi19G0000900.3 Alkaloid PMT medium borderline
SIchi19G0004240.1 Alkaloid PMT medium pass
SIchi19G0004240.2 Alkaloid PMT medium pass
SIchi19G0004240.3 Alkaloid PMT medium pass
SIchi21G0001700.1 Alkaloid PMT medium pass
SIchi21G0001800.1 Alkaloid PMT medium pass
SIchi23G0004230.1 Alkaloid PMT medium pass
SIchi23G0004230.2 Alkaloid PMT medium pass
SIchi26G0003400.1 Alkaloid PMT low borderline
SIchi01G0002280.1 Alkaloid PYKS low borderline
SIchi02G0003660.1 Alkaloid PYKS low borderline
SIchi02G0003660.2 Alkaloid PYKS low borderline
SIchi03G0005290.1 Alkaloid PYKS high pass
SIchi03G0005300.1 Alkaloid PYKS high pass
SIchi06G0003980.1 Alkaloid PYKS low borderline
SIchi07G0003850.1 Alkaloid PYKS high pass
SIchi07G0003860.1 Alkaloid PYKS high pass
SIchi07G0003870.1 Alkaloid PYKS high pass
SIchi07G0007170.1 Alkaloid PYKS low borderline
SIchi08G0005130.1 Alkaloid PYKS low borderline
SIchi08G0005230.1 Alkaloid PYKS low borderline
SIchi08G0006890.1 Alkaloid PYKS low borderline
SIchi10G0005250.1 Alkaloid PYKS medium pass
SIchi10G0005260.1 Alkaloid PYKS high pass
SIchi11G0003350.1 Alkaloid PYKS low borderline
SIchi11G0005910.1 Alkaloid PYKS high pass
SIchi13G0004890.1 Alkaloid PYKS low borderline
SIchi13G0004900.1 Alkaloid PYKS low borderline
SIchi13G0004900.2 Alkaloid PYKS low borderline
SIchi14G0002070.1 Alkaloid PYKS low borderline
SIchi14G0003930.1 Alkaloid PYKS low borderline
SIchi14G0006600.1 Alkaloid PYKS low borderline
SIchi14G0006600.2 Alkaloid PYKS low borderline
SIchi14G0006600.3 Alkaloid PYKS low borderline