PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

2205
Candidate Protein Records
1765
Pathway-Level Records
4100
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
SIchi14G0000880.1 Alkaloid T16H medium borderline
SIchi15G0003480.1 Alkaloid T16H medium borderline
SIchi15G0006540.1 Alkaloid T16H medium borderline
SIchi15G0006540.2 Alkaloid T16H medium borderline
SIchi15G0006540.3 Alkaloid T16H medium borderline
SIchi15G0006540.4 Alkaloid T16H medium borderline
SIchi15G0006540.5 Alkaloid T16H medium borderline
SIchi15G0006540.6 Alkaloid T16H medium borderline
SIchi15G0006540.7 Alkaloid T16H medium borderline
SIchi17G0002030.1 Alkaloid T16H medium borderline
SIchi25G0005520.1 Alkaloid T16H low borderline
SIchi26G0003730.1 Alkaloid T16H medium borderline
SIchi26G0003760.1 Alkaloid T16H low borderline
SIchi26G0003790.1 Alkaloid T16H medium borderline
SIchi26G0003810.1 Alkaloid T16H low borderline
SIchi26G0003820.1 Alkaloid T16H low borderline
SIchi26G0003850.1 Alkaloid T16H low borderline
SIchi26G0003890.1 Alkaloid T16H low borderline
SIchi26G0003960.1 Alkaloid T16H low borderline
SIchi01G0006290.1 Alkaloid T3O medium pass
SIchi01G0006290.3 Alkaloid T3O medium pass
SIchi01G0006290.5 Alkaloid T3O medium pass
SIchi01G0006310.1 Alkaloid T3O medium pass
SIchi01G0007670.3 Alkaloid T3O low borderline
SIchi01G0007670.4 Alkaloid T3O low borderline
SIchi01G0008730.1 Alkaloid T3O low borderline
SIchi01G0008730.2 Alkaloid T3O low borderline
SIchi01G0008990.1 Alkaloid T3O medium borderline
SIchi01G0009000.1 Alkaloid T3O medium borderline
SIchi02G0002010.1 Alkaloid T3O medium borderline
SIchi02G0002420.1 Alkaloid T3O medium pass
SIchi02G0007100.1 Alkaloid T3O medium pass
SIchi02G0007100.2 Alkaloid T3O medium pass
SIchi02G0007600.1 Alkaloid T3O medium borderline
SIchi03G0001780.1 Alkaloid T3O medium borderline
SIchi03G0001900.1 Alkaloid T3O medium borderline
SIchi03G0001900.2 Alkaloid T3O medium borderline
SIchi03G0001900.3 Alkaloid T3O medium borderline
SIchi03G0003390.1 Alkaloid T3O medium borderline
SIchi03G0003400.1 Alkaloid T3O medium borderline
SIchi03G0004330.1 Alkaloid T3O low borderline
SIchi03G0004350.1 Alkaloid T3O low borderline
SIchi03G0007230.1 Alkaloid T3O medium pass
SIchi03G0007230.2 Alkaloid T3O low borderline
SIchi03G0007230.3 Alkaloid T3O medium pass
SIchi03G0011110.1 Alkaloid T3O medium borderline
SIchi04G0001220.1 Alkaloid T3O medium borderline
SIchi04G0001240.1 Alkaloid T3O medium borderline
SIchi04G0001320.1 Alkaloid T3O medium borderline
SIchi04G0001340.1 Alkaloid T3O medium borderline