PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

2205
Candidate Protein Records
1765
Pathway-Level Records
4100
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
SIchi15G0003010.1 Alkaloid T3O medium borderline
SIchi15G0003500.1 Alkaloid T3O medium borderline
SIchi15G0006130.1 Alkaloid T3O medium pass
SIchi15G0006200.1 Alkaloid T3O medium pass
SIchi15G0006630.1 Alkaloid T3O medium borderline
SIchi15G0006640.1 Alkaloid T3O medium borderline
SIchi15G0007120.1 Alkaloid T3O medium borderline
SIchi16G0004710.1 Alkaloid T3O low borderline
SIchi17G0004960.1 Alkaloid T3O low borderline
SIchi19G0007970.1 Alkaloid T3O low borderline
SIchi20G0001210.1 Alkaloid T3O medium pass
SIchi20G0001260.1 Alkaloid T3O medium borderline
SIchi20G0001270.1 Alkaloid T3O medium borderline
SIchi20G0003090.1 Alkaloid T3O medium pass
SIchi20G0003090.2 Alkaloid T3O medium pass
SIchi20G0003090.3 Alkaloid T3O medium pass
SIchi20G0004850.1 Alkaloid T3O medium borderline
SIchi20G0004850.2 Alkaloid T3O medium borderline
SIchi21G0007190.1 Alkaloid T3O low borderline
SIchi22G0000620.1 Alkaloid T3O medium borderline
SIchi22G0004470.1 Alkaloid T3O medium borderline
SIchi23G0001350.1 Alkaloid T3O medium borderline
SIchi23G0001930.1 Alkaloid T3O medium borderline
SIchi25G0005510.1 Alkaloid T3O low borderline
SIchi25G0005530.1 Alkaloid T3O low borderline
SIchi25G0005530.2 Alkaloid T3O low borderline
SIchi26G0002380.1 Alkaloid T3O medium borderline
SIchi26G0003740.1 Alkaloid T3O medium borderline
SIchi26G0003800.1 Alkaloid T3O medium borderline
SIchi26G0003830.1 Alkaloid T3O medium borderline
SIchi26G0003840.1 Alkaloid T3O medium borderline
SIchi26G0003910.1 Alkaloid T3O medium borderline
SIchi26G0003920.1 Alkaloid T3O medium borderline
SIchi26G0003930.1 Alkaloid T3O medium borderline
SIchi26G0003950.1 Alkaloid T3O medium borderline
SIchi02G0004210.1 Alkaloid TDC low borderline
SIchi02G0004210.2 Alkaloid TDC low borderline
SIchi05G0002650.1 Alkaloid TDC low borderline
SIchi05G0002810.1 Alkaloid TDC medium borderline
SIchi21G0001560.1 Alkaloid TDC medium borderline
SIchi24G0000610.1 Alkaloid TDC low borderline
SIchi01G0004020.1 Alkaloid TRI/TRII medium pass
SIchi01G0004020.2 Alkaloid TRI/TRII medium pass
SIchi01G0004570.1 Alkaloid TRI/TRII medium pass
SIchi01G0004590.1 Alkaloid TRI/TRII medium pass
SIchi01G0004600.1 Alkaloid TRI/TRII medium pass
SIchi01G0004600.2 Alkaloid TRI/TRII medium pass
SIchi01G0004600.3 Alkaloid TRI/TRII medium pass
SIchi01G0004600.4 Alkaloid TRI/TRII medium pass
SIchi02G0000480.1 Alkaloid TRI/TRII medium pass