PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

1765
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
SIchi14G0007520.2 Alkaloid 7DLGT high pass
SIchi15G0005940.1 Alkaloid 7DLGT low borderline
SIchi16G0000590.1 Alkaloid 7DLGT low borderline
SIchi16G0000600.1 Alkaloid 7DLGT low borderline
SIchi16G0001420.1 Alkaloid 7DLGT low borderline
SIchi16G0004860.1 Alkaloid 7DLGT low borderline
SIchi16G0011680.1 Alkaloid 7DLGT low borderline
SIchi17G0001300.1 Alkaloid 7DLGT low borderline
SIchi17G0001540.1 Alkaloid 7DLGT medium pass
SIchi17G0002040.1 Alkaloid 7DLGT low borderline
SIchi17G0002290.1 Alkaloid 7DLGT low borderline
SIchi17G0002290.2 Alkaloid 7DLGT low borderline
SIchi18G0001760.1 Alkaloid 7DLGT medium pass
SIchi18G0006350.1 Alkaloid 7DLGT high pass
SIchi18G0006350.2 Alkaloid 7DLGT low borderline
SIchi19G0000980.1 Alkaloid 7DLGT low borderline
SIchi19G0001000.1 Alkaloid 7DLGT low borderline
SIchi19G0001010.1 Alkaloid 7DLGT low borderline
SIchi20G0005840.1 Alkaloid 7DLGT medium pass
SIchi21G0005240.1 Alkaloid 7DLGT low borderline
SIchi22G0001030.1 Alkaloid 7DLGT medium pass
SIchi23G0000270.1 Alkaloid 7DLGT high pass
SIchi23G0000280.1 Alkaloid 7DLGT medium pass
SIchi23G0001400.1 Alkaloid 7DLGT low borderline
SIchi23G0001410.1 Alkaloid 7DLGT medium pass
SIchi23G0001420.1 Alkaloid 7DLGT low borderline
SIchi23G0002210.1 Alkaloid 7DLGT low borderline
SIchi23G0002220.1 Alkaloid 7DLGT medium pass
SIchi23G0002230.1 Alkaloid 7DLGT low borderline
SIchi23G0002280.1 Alkaloid 7DLGT low borderline
SIchi23G0002290.1 Alkaloid 7DLGT medium pass
SIchi23G0002310.1 Alkaloid 7DLGT low borderline
SIchi23G0002690.1 Alkaloid 7DLGT low borderline
SIchi24G0001140.1 Alkaloid 7DLGT low borderline
SIchi25G0001190.1 Alkaloid 7DLGT low borderline
SIchi25G0003120.1 Alkaloid 7DLGT high pass
SIchi25G0003130.1 Alkaloid 7DLGT medium pass
SIchi25G0003140.1 Alkaloid 7DLGT medium pass
SIchi25G0003750.1 Alkaloid 7DLGT low borderline
SIchi25G0003760.1 Alkaloid 7DLGT low borderline
SIchi25G0005350.1 Alkaloid 7DLGT medium pass
SIchi25G0005350.2 Alkaloid 7DLGT low borderline
SIchi25G0005350.3 Alkaloid 7DLGT low borderline
SIchi25G0005360.1 Alkaloid 7DLGT low borderline
SIchi25G0005780.1 Alkaloid 7DLGT low borderline
SIchi25G0005790.1 Alkaloid 7DLGT low borderline
SIchi26G0000130.1 Alkaloid 7DLGT medium pass
SIchi26G0000700.1 Alkaloid 7DLGT medium pass
SIchi01G0009650.1 Alkaloid 7DLH medium borderline
SIchi02G0006380.2 Alkaloid 7DLH medium borderline