PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

1765
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
SIchi03G0010820.1 Alkaloid 7DLH medium borderline
SIchi03G0010880.1 Alkaloid 7DLH medium pass
SIchi06G0001500.1 Alkaloid 7DLH medium borderline
SIchi06G0001500.2 Alkaloid 7DLH medium borderline
SIchi11G0006210.1 Alkaloid 7DLH low borderline
SIchi11G0006210.2 Alkaloid 7DLH low borderline
SIchi11G0006210.3 Alkaloid 7DLH low borderline
SIchi11G0006210.4 Alkaloid 7DLH low borderline
SIchi16G0007840.1 Alkaloid 7DLH medium borderline
SIchi16G0007850.1 Alkaloid 7DLH medium borderline
SIchi16G0007850.2 Alkaloid 7DLH medium borderline
SIchi16G0007890.1 Alkaloid 7DLH medium borderline
SIchi18G0003490.1 Alkaloid 7DLH medium borderline
SIchi19G0004130.1 Alkaloid 7DLH low borderline
SIchi20G0005820.1 Alkaloid 7DLH medium borderline
SIchi20G0005820.3 Alkaloid 7DLH medium borderline
SIchi20G0005820.4 Alkaloid 7DLH low borderline
SIchi21G0006240.1 Alkaloid 7DLH medium borderline
SIchi21G0006240.2 Alkaloid 7DLH medium borderline
SIchi26G0001680.1 Alkaloid 7DLH medium borderline
SIchi02G0008980.1 Alkaloid 8HGO medium borderline
SIchi10G0006240.1 Alkaloid 8HGO medium pass
SIchi15G0004610.1 Alkaloid 8HGO medium pass
SIchi15G0004620.1 Alkaloid 8HGO medium borderline
SIchi15G0004630.1 Alkaloid 8HGO medium borderline
SIchi15G0004630.2 Alkaloid 8HGO medium borderline
SIchi15G0004630.3 Alkaloid 8HGO medium borderline
SIchi15G0005280.1 Alkaloid 8HGO low borderline
SIchi17G0001810.1 Alkaloid 8HGO medium borderline
SIchi17G0002520.1 Alkaloid 8HGO medium borderline
SIchi17G0002520.2 Alkaloid 8HGO medium borderline
SIchi17G0006710.2 Alkaloid 8HGO low borderline
SIchi20G0003360.1 Alkaloid 8HGO medium borderline
SIchi20G0003360.2 Alkaloid 8HGO medium pass
SIchi20G0003360.3 Alkaloid 8HGO medium pass
SIchi20G0003360.4 Alkaloid 8HGO medium borderline
SIchi20G0003360.5 Alkaloid 8HGO medium borderline
SIchi23G0000360.1 Alkaloid 8HGO medium borderline
SIchi24G0003640.1 Alkaloid 8HGO medium borderline
SIchi24G0003640.2 Alkaloid 8HGO medium borderline
SIchi24G0003640.3 Alkaloid 8HGO medium borderline
SIchi24G0003640.4 Alkaloid 8HGO medium borderline
SIchi26G0004590.1 Alkaloid 8HGO medium borderline
SIchi26G0004600.1 Alkaloid 8HGO medium borderline
SIchi08G0000930.1 Alkaloid ADC medium pass
SIchi18G0005400.1 Alkaloid ADC medium pass
SIchi01G0005240.1 Alkaloid BBE low borderline
SIchi01G0005240.2 Alkaloid BBE low borderline
SIchi01G0005240.3 Alkaloid BBE low borderline
SIchi01G0005240.4 Alkaloid BBE low borderline