PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

1765
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
SIchi17G0005310.1 Flavonoid ANS/LDOX medium borderline
SIchi17G0005380.1 Flavonoid ANS/LDOX low borderline
SIchi17G0005390.1 Flavonoid ANS/LDOX low borderline
SIchi17G0005400.1 Flavonoid ANS/LDOX low borderline
SIchi01G0006310.1 Flavonoid C4H low borderline
SIchi01G0008980.1 Flavonoid C4H low borderline
SIchi01G0009650.1 Flavonoid C4H medium borderline
SIchi02G0002020.1 Flavonoid C4H medium borderline
SIchi04G0001280.1 Flavonoid C4H low borderline
SIchi04G0001450.1 Flavonoid C4H low borderline
SIchi06G0008060.1 Flavonoid C4H medium borderline
SIchi06G0008110.1 Flavonoid C4H medium borderline
SIchi14G0000870.1 Flavonoid C4H low borderline
SIchi18G0000840.1 Flavonoid C4H medium borderline
SIchi18G0000840.2 Flavonoid C4H medium borderline
SIchi26G0003850.1 Flavonoid C4H medium borderline
SIchi03G0010790.1 Flavonoid CHI low borderline
SIchi06G0001890.1 Flavonoid CHI medium pass
SIchi06G0001900.1 Flavonoid CHI medium pass
SIchi11G0005840.1 Flavonoid CHI medium pass
SIchi11G0005840.2 Flavonoid CHI medium pass
SIchi03G0005290.1 Flavonoid CHS medium pass
SIchi03G0005300.1 Flavonoid CHS medium pass
SIchi07G0003850.1 Flavonoid CHS medium pass
SIchi07G0003860.1 Flavonoid CHS medium pass
SIchi07G0003870.1 Flavonoid CHS medium pass
SIchi10G0005250.1 Flavonoid CHS medium pass
SIchi10G0005260.1 Flavonoid CHS medium pass
SIchi11G0003350.1 Flavonoid CHS low borderline
SIchi11G0005910.1 Flavonoid CHS medium pass
SIchi16G0005760.1 Flavonoid CHS medium pass
SIchi16G0005770.1 Flavonoid CHS medium pass
SIchi18G0006710.1 Flavonoid CHS medium pass
SIchi26G0001400.1 Flavonoid CHS medium pass
SIchi02G0009300.1 Flavonoid DFR medium borderline
SIchi02G0009300.2 Flavonoid DFR medium borderline
SIchi04G0006430.1 Flavonoid DFR medium borderline
SIchi10G0006220.1 Flavonoid DFR medium borderline
SIchi10G0008330.1 Flavonoid DFR medium borderline
SIchi11G0007350.1 Flavonoid DFR medium borderline
SIchi11G0007350.2 Flavonoid DFR medium borderline
SIchi11G0007350.3 Flavonoid DFR medium borderline
SIchi11G0007350.4 Flavonoid DFR medium borderline
SIchi13G0010920.1 Flavonoid DFR medium borderline
SIchi14G0006610.2 Flavonoid DFR medium borderline
SIchi16G0011350.1 Flavonoid DFR medium borderline
SIchi16G0011360.1 Flavonoid DFR medium borderline
SIchi18G0005640.1 Flavonoid DFR medium borderline
SIchi01G0002630.1 Flavonoid F3'5'H/CYP75A medium borderline
SIchi01G0006290.1 Flavonoid F3'5'H/CYP75A medium borderline