PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

2205
Candidate Protein Records
1765
Pathway-Level Records
4100
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
SIchi09G0009150.1 Alkaloid BBE low borderline
SIchi15G0000690.1 Alkaloid BBE medium borderline
SIchi15G0000710.1 Alkaloid BBE low borderline
SIchi15G0000730.1 Alkaloid BBE medium borderline
SIchi17G0000540.1 Alkaloid BBE medium borderline
SIchi17G0004470.1 Alkaloid BBE medium borderline
SIchi17G0004490.1 Alkaloid BBE low borderline
SIchi17G0004530.1 Alkaloid BBE medium borderline
SIchi19G0006100.1 Alkaloid BBE low borderline
SIchi25G0001280.1 Alkaloid BBE medium borderline
SIchi25G0001300.1 Alkaloid BBE medium borderline
SIchi25G0001310.1 Alkaloid BBE medium borderline
SIchi25G0001320.1 Alkaloid BBE medium borderline
SIchi25G0001330.1 Alkaloid BBE medium borderline
SIchi04G0000210.1 Alkaloid CNMT low borderline
SIchi04G0006190.1 Alkaloid CNMT low borderline
SIchi06G0001060.1 Alkaloid CNMT medium borderline
SIchi07G0006570.3 Alkaloid CNMT low borderline
SIchi07G0006570.6 Alkaloid CNMT low borderline
SIchi11G0002060.1 Alkaloid CNMT low borderline
SIchi12G0003760.1 Alkaloid CNMT low borderline
SIchi13G0006090.1 Alkaloid CNMT medium pass
SIchi16G0002430.1 Alkaloid CNMT low borderline
SIchi01G0003420.1 Alkaloid CODM/T6ODM medium borderline
SIchi01G0003420.2 Alkaloid CODM/T6ODM medium borderline
SIchi01G0008270.1 Alkaloid CODM/T6ODM medium borderline
SIchi01G0008930.1 Alkaloid CODM/T6ODM medium borderline
SIchi02G0004750.3 Alkaloid CODM/T6ODM medium borderline
SIchi02G0004770.3 Alkaloid CODM/T6ODM medium borderline
SIchi03G0004190.1 Alkaloid CODM/T6ODM medium borderline
SIchi03G0004190.2 Alkaloid CODM/T6ODM medium borderline
SIchi05G0006180.1 Alkaloid CODM/T6ODM medium borderline
SIchi06G0006970.1 Alkaloid CODM/T6ODM medium borderline
SIchi07G0001880.1 Alkaloid CODM/T6ODM medium borderline
SIchi07G0001880.2 Alkaloid CODM/T6ODM medium borderline
SIchi07G0004020.1 Alkaloid CODM/T6ODM medium borderline
SIchi07G0004020.2 Alkaloid CODM/T6ODM medium borderline
SIchi07G0007370.1 Alkaloid CODM/T6ODM medium borderline
SIchi08G0000200.1 Alkaloid CODM/T6ODM medium borderline
SIchi08G0003810.1 Alkaloid CODM/T6ODM medium borderline
SIchi08G0003880.1 Alkaloid CODM/T6ODM medium borderline
SIchi08G0003880.2 Alkaloid CODM/T6ODM medium borderline
SIchi08G0003880.3 Alkaloid CODM/T6ODM medium borderline
SIchi08G0006080.3 Alkaloid CODM/T6ODM medium borderline
SIchi08G0008390.2 Alkaloid CODM/T6ODM medium borderline
SIchi09G0000170.1 Alkaloid CODM/T6ODM medium borderline
SIchi11G0005110.1 Alkaloid CODM/T6ODM medium borderline
SIchi11G0005880.1 Alkaloid CODM/T6ODM medium borderline
SIchi12G0009070.1 Alkaloid CODM/T6ODM medium borderline
SIchi13G0005200.1 Alkaloid CODM/T6ODM medium borderline