PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

1765
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
SIchi26G0003910.1 Phenylpropanoid C3'H/CYP98A medium borderline
SIchi26G0003920.1 Phenylpropanoid C3'H/CYP98A medium borderline
SIchi26G0003930.1 Phenylpropanoid C3'H/CYP98A medium pass
SIchi26G0003950.1 Phenylpropanoid C3'H/CYP98A medium borderline
SIchi01G0006290.1 Phenylpropanoid C4H/CYP73A medium borderline
SIchi01G0006290.2 Phenylpropanoid C4H/CYP73A low borderline
SIchi01G0006290.3 Phenylpropanoid C4H/CYP73A medium borderline
SIchi01G0006290.4 Phenylpropanoid C4H/CYP73A low borderline
SIchi01G0008980.1 Phenylpropanoid C4H/CYP73A low borderline
SIchi01G0009650.1 Phenylpropanoid C4H/CYP73A medium borderline
SIchi02G0002020.1 Phenylpropanoid C4H/CYP73A medium pass
SIchi04G0001280.1 Phenylpropanoid C4H/CYP73A low borderline
SIchi04G0001290.1 Phenylpropanoid C4H/CYP73A low borderline
SIchi06G0008110.1 Phenylpropanoid C4H/CYP73A medium borderline
SIchi11G0004290.1 Phenylpropanoid C4H/CYP73A low borderline
SIchi15G0006650.1 Phenylpropanoid C4H/CYP73A medium borderline
SIchi18G0000840.1 Phenylpropanoid C4H/CYP73A medium borderline
SIchi18G0000840.2 Phenylpropanoid C4H/CYP73A low borderline
SIchi20G0001280.1 Phenylpropanoid C4H/CYP73A low borderline
SIchi22G0000620.1 Phenylpropanoid C4H/CYP73A medium borderline
SIchi26G0003760.1 Phenylpropanoid C4H/CYP73A low borderline
SIchi26G0003790.1 Phenylpropanoid C4H/CYP73A low borderline
SIchi26G0003890.1 Phenylpropanoid C4H/CYP73A low borderline
SIchi26G0003960.1 Phenylpropanoid C4H/CYP73A low borderline
SIchi02G0002460.1 Phenylpropanoid CAD medium borderline
SIchi02G0002510.1 Phenylpropanoid CAD medium borderline
SIchi02G0005910.2 Phenylpropanoid CAD medium borderline
SIchi02G0008760.1 Phenylpropanoid CAD medium pass
SIchi03G0000520.1 Phenylpropanoid CAD medium pass
SIchi03G0009220.1 Phenylpropanoid CAD low borderline
SIchi03G0009220.2 Phenylpropanoid CAD low borderline
SIchi03G0009220.3 Phenylpropanoid CAD low borderline
SIchi03G0009230.1 Phenylpropanoid CAD low borderline
SIchi03G0009280.1 Phenylpropanoid CAD low borderline
SIchi03G0009280.2 Phenylpropanoid CAD medium pass
SIchi03G0009280.3 Phenylpropanoid CAD low borderline
SIchi03G0009280.4 Phenylpropanoid CAD medium pass
SIchi03G0009310.1 Phenylpropanoid CAD low borderline
SIchi03G0009330.1 Phenylpropanoid CAD low borderline
SIchi03G0009330.2 Phenylpropanoid CAD low borderline
SIchi03G0009330.3 Phenylpropanoid CAD low borderline
SIchi03G0009330.4 Phenylpropanoid CAD low borderline
SIchi05G0008400.1 Phenylpropanoid CAD low borderline
SIchi05G0008400.2 Phenylpropanoid CAD medium pass
SIchi06G0006460.1 Phenylpropanoid CAD low borderline
SIchi06G0006460.2 Phenylpropanoid CAD low borderline
SIchi06G0006460.3 Phenylpropanoid CAD low borderline
SIchi06G0006460.4 Phenylpropanoid CAD low borderline
SIchi08G0001380.1 Phenylpropanoid CAD medium pass
SIchi08G0001380.2 Phenylpropanoid CAD medium pass